Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2768 98.7 9e-16 >seq2768 Length=91863 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| || || || || | |||| || ||||||||||| ||||| || || || Sbjct 14463 TCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTG 14522 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || |||| || | || | ||| ||||| || || || ||||| |||| Sbjct 14523 TCTTGAATCTTCGACTTGA-CGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAAT 14581 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||| || ||||| || |||||||| ||||| Sbjct 14582 CGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||||| | || | ||| || | || || || ||| | Sbjct 13971 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAG 14030 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||| || ||||||||||| || || || || ||||| ||||| || |||| || | Sbjct 14031 ATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 14089 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||| || ||||| || |||||||||| || || || || || || || || Sbjct 14090 GTCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGAC 14149 Query 45329 AAAAATTTGCAT 45340 ||||| ||||| Sbjct 14150 GAAAATCTGCAT 14161 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| | || || ||||| ||||| || ||||| Sbjct 14160 ATACCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCA 14219 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || ||| | |||| || ||||||||||| Sbjct 14220 GACAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 14279 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || |||||||| || || |||| || | || | || || || ||||| Sbjct 14280 GGGATGCCCTCCTTATCTTGGATCTTAGACTTGA-CGTTGTCGATCGTATCCGACGACTC 14338 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| || |||| || || ||||| || || || || || |||||||| Sbjct 14339 GACTTCCAGGGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451985537974960