Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2768 98.7 9e-16
>seq2768
Length=91863
Score = 98.7 bits (108), Expect = 9e-16
Identities = 117/156 (75%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| ||||| || || || || | |||| || ||||||||||| ||||| || || ||
Sbjct 14463 TCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTG 14522
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|||||||| || |||| || | || | ||| ||||| || || || ||||| ||||
Sbjct 14523 TCTTGAATCTTCGACTTGA-CGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAAT 14581
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| ||||| || ||||| || |||||||| |||||
Sbjct 14582 CGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| || | || || || ||| |
Sbjct 13971 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAG 14030
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
||||| || ||||||||||| || || || || ||||| ||||| || |||| || |
Sbjct 14031 ATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 14089
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| || ||||| || |||||||||| || || || || || || || ||
Sbjct 14090 GTCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGAC 14149
Query 45329 AAAAATTTGCAT 45340
||||| |||||
Sbjct 14150 GAAAATCTGCAT 14161
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| | || || ||||| ||||| || |||||
Sbjct 14160 ATACCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCA 14219
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || || || ||| | |||| || |||||||||||
Sbjct 14220 GACAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGT 14279
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| ||||| || |||||||| || || |||| || | || | || || || |||||
Sbjct 14280 GGGATGCCCTCCTTATCTTGGATCTTAGACTTGA-CGTTGTCGATCGTATCCGACGACTC 14338
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| || |||| || || ||||| || || || || || ||||||||
Sbjct 14339 GACTTCCAGGGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451985537974960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |