Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2768 145 2e-29 seq2808 136 9e-27 seq123 104 6e-17 seq894 96.9 8e-15 seq781 96.9 8e-15 seq627 96.9 8e-15 seq2512 84.2 5e-11 >seq2768 Length=91863 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | |||||||||||||||||| || | ||||||||||| | ||| Sbjct 14625 CGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTG 14684 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||| || || ||||||||||| ||| ||| || Sbjct 14685 CGGCCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCC 14744 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| |||||| | || || || ||||| Sbjct 14745 TCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAAA 14804 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || || || || || || Sbjct 14805 GTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 14842 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || || |||||||| || | ||||||||| | || || Sbjct 14397 CGAAGGCGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTG 14456 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||| |||||| || || ||||| || |||||||||||||| ||| || Sbjct 14457 CGGCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCC 14516 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| ||| || | ||| || | || ||| || || | | Sbjct 14517 TCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAGC 14576 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || ||||| || |||||||| || Sbjct 14577 GTAATCGTCTTGCCAGTAAGAGTCTTGACAAAAATCTG 14614 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| |||||| |||| ||||||||| || ||| Sbjct 13941 CGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTC 14000 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| || |||||||| || |||||||| | ||||||||||||||| || || Sbjct 14001 CTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACCC 14060 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| || | |||||| | | || || || | Sbjct 14061 TCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGA 14120 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || ||||| || Sbjct 14121 GTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTG 14158 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 14862 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 14921 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| ||||| ||||||||||| |||||| || || Sbjct 14922 TCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 14981 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 14982 TGGATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 15041 Query 199598 TTACCCGT 199605 || || || Sbjct 15042 TTGCCAGT 15049 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || | || |||||||| |||| |||||| |||| || || | ||||| Sbjct 14178 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCC 14237 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| || || |||||||||||||| || || || || Sbjct 14238 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 14297 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| || || | | || || |||| || || ||| Sbjct 14298 TGGATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTC 14357 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || ||||| Sbjct 14358 TTTCCGGTGAGGGTCTTGACGAAGATTTG 14386 >seq2808 Length=116519 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||||||| | ||| ||||| |||||||| |||| ||||||||| | | || Sbjct 80915 CGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 80856 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 80855 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCC 80796 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | Sbjct 80795 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGG 80736 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || ||||| || ||||| Sbjct 80735 GTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTG 80698 >seq123 Length=208 Score = 104 bits (114), Expect = 6e-17 Identities = 104/133 (78%), Gaps = 9/133 (7%) Strand=Plus/Minus Query 43127 CTTGGCTGCGGATTGTCCAATCCTCAACATTTTTACCATACCC-ACGCCATTACGCTTGG 43185 |||||||||||||||||||||||| || || ||||||||||| | | |||||| | ||| Sbjct 159 CTTGGCTGCGGATTGTCCAATCCTAGACGTTATTACCATACCCGAGGTCATTACCCCTGG 100 Query 43186 TG----CAACTCTTTCGAGAA----GCGGTAGTTGAGGCTCTAAGGAGTTTCCCGCAATT 43237 || | | ||||| ||| |||||||| |||||||||||| ||||||||||| Sbjct 99 TGCGCACCCCCCTTTCAGGAAGGCTGCGGTAGTCTAGGCTCTAAGGATGTTCCCGCAATT 40 Query 43238 TGAGGATGTTGCC 43250 ||| ||||||| Sbjct 39 TGACAGTGTTGCC 27 >seq894 Length=211 Score = 96.9 bits (106), Expect = 8e-15 Identities = 103/132 (78%), Gaps = 8/132 (6%) Strand=Plus/Plus Query 43127 CTTGGCTGCGGATTGTCCAATCCTCAACATTTTTACCATACCC-ACGCCATTACGCTTG- 43184 |||||||||||||||||||||||| || || ||||||||||| | | |||||| || | Sbjct 35 CTTGGCTGCGGATTGTCCAATCCTAGACGTTATTACCATACCCGAGGTCATTACCCTGGT 94 Query 43185 GTGCA--ACTCTTTCGAGAA----GCGGTAGTTGAGGCTCTAAGGAGTTTCCCGCAATTT 43238 | ||| | | ||| ||| |||||||| |||||||||||| |||||||||||| Sbjct 95 GCGCACCCCCCGTTCAGGAAGGCTGCGGTAGTCTAGGCTCTAAGGATGTTCCCGCAATTT 154 Query 43239 GAGGATGTTGCC 43250 || ||||||| Sbjct 155 GACAGTGTTGCC 166 >seq781 Length=211 Score = 96.9 bits (106), Expect = 8e-15 Identities = 103/132 (78%), Gaps = 8/132 (6%) Strand=Plus/Minus Query 43127 CTTGGCTGCGGATTGTCCAATCCTCAACATTTTTACCATACCC-ACGCCATTACGCTTG- 43184 |||||||||||||||||||||||| || | ||||||||||| | | |||||| || | Sbjct 135 CTTGGCTGCGGATTGTCCAATCCTAGACGCTATTACCATACCCGAGGTCATTACCCTGGT 76 Query 43185 GTGCAACTC--TTTCGAGAAG----CGGTAGTTGAGGCTCTAAGGAGTTTCCCGCAATTT 43238 | ||| | | |||| |||| ||||||| |||||||||||| |||||||||||| Sbjct 75 GCGCACCCCCCTTTCAGGAAGGCTGCGGTAGTCTAGGCTCTAAGGATGTTCCCGCAATTT 16 Query 43239 GAGGATGTTGCC 43250 || ||||||| Sbjct 15 GACAGTGTTGCC 4 >seq627 Length=211 Score = 96.9 bits (106), Expect = 8e-15 Identities = 104/132 (79%), Gaps = 8/132 (6%) Strand=Plus/Minus Query 43127 CTTGGCTGCGGATTGTCCAATCCTCAACATTTTTACCATACCC-ACGCCATTACGCTTG- 43184 |||||||||||||||||||||||| || || ||||||||||| | | |||||| || | Sbjct 185 CTTGGCTGCGGATTGTCCAATCCTAGACGTTATTACCATACCCGAGGTCATTACCCTGGT 126 Query 43185 GTGCA--ACTCTTTC--GA--GAAGCGGTAGTTGAGGCTCTAAGGAGTTTCCCGCAATTT 43238 | ||| | ||||| || | |||||||| |||||||||||| |||||||||||| Sbjct 125 GCGCACCCCCCTTTCAGGACGGCTGCGGTAGTCTAGGCTCTAAGGATGTTCCCGCAATTT 66 Query 43239 GAGGATGTTGCC 43250 || ||||||| Sbjct 65 GACAGTGTTGCC 54 >seq2512 Length=28997 Score = 84.2 bits (92), Expect = 5e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | || | |||||| || |||||||| || ||||||| Sbjct 21227 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGA 21168 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || || ||||||||||| |||||| || ||||| ||||| ||| || | Sbjct 21167 TCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 21108 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || || | | || || || | ||||| ||||| ||||| Sbjct 21107 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 21062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178874381979442