Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq2808 152 6e-32
seq2768 143 3e-29
seq2512 113 5e-20
>seq2808
Length=116519
Score = 152 bits (168), Expect = 6e-32
Identities = 149/192 (78%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| |||| ||||||||||||||||||||
Sbjct 80886 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 80827
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | | |||||||||| |||||| ||||| |
Sbjct 80826 GATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 80767
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| ||| ||||| || | ||||| || ||||||||||| || || ||
Sbjct 80766 GTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 80707
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 80706 GAAGATTTGCAT 80695
>seq2768
Length=91863
Score = 143 bits (158), Expect = 3e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||| || |||||||| |||| || ||||||||||| |||||
Sbjct 14654 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 14713
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | || |||||||||| ||||||| ||| | |
Sbjct 14714 AATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 14773
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || ||||| |||| |||||||| |||||||| || || || ||
Sbjct 14774 ATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 14833
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 14834 GAAGATCTGCAT 14845
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| ||||| |||||| ||||| ||||| || || || || || | || |||
Sbjct 14181 ACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCCTCG 14240
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| |||| |||||||||||| | || | || |||||| || |
Sbjct 14241 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGG 14300
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| ||||| ||| | | | ||| || ||| || || |||| || || || ||
Sbjct 14301 ATCTTAGACTTGA-CGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTCTT 14359
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || |||||||||||
Sbjct 14360 TCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| ||||| || |||||| || || |||||||| || || ||||| |||| ||
Sbjct 14409 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 14468
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
| ||||||||| || || |||| |||||||||||| | || | | |||||||||
Sbjct 14469 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGA 14528
Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| ||| | | | || ||| |||||||| || | ||| || || ||
Sbjct 14529 ATCTTCGACTTGA-CGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCTT 14587
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || ||||| || |||||
Sbjct 14588 GCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617
Score = 109 bits (120), Expect = 6e-19
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| ||| || | | ||| | ||||| || | || |||||||| ||||| ||||||
Sbjct 13929 TATTGGCCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAG 13988
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
||| || || | | | || ||||||||||| || ||||| ||||| |||||||||||
Sbjct 13989 TCGCTCAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCC 14048
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539
| || | | |||||| ||| ||||| ||||| ||| | | | ||||| |||
Sbjct 14049 GGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGACGA 14107
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | || ||||| || || ||||| || || || || || |||||
Sbjct 14108 CTCAACCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161
Score = 107 bits (118), Expect = 2e-18
Identities = 128/171 (75%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || |||||||||||||||||
Sbjct 14882 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 14941
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| || |||||||| | || | | ||||||||| |||||| |||| | |||
Sbjct 14942 GATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTT-AACGT 15000
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | | || ||| || || || || | |||||||| ||||| ||||
Sbjct 15001 TGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 15051
>seq2512
Length=28997
Score = 113 bits (124), Expect = 5e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| || ||||| | || || ||||||||||| ||||| |
Sbjct 21227 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGA 21168
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||| |||||||| | || | | |||||||||| ||||||| ||||| |
Sbjct 21167 TCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 21108
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | || ||| || || || || | |||||||| |||||||||| || || || |
Sbjct 21107 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 21048
Query 46584 AG 46585
||
Sbjct 21047 AG 21046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565216313309520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |