Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq2808 147 5e-30
seq2768 143 6e-29
>seq2808
Length=116519
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
|||||||| || | ||||||||||||||| || || || ||||| || | ||| || |
Sbjct 80913 GAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 80854
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|| || ||||||||||| || |||||||| || || || ||||| || ||||| || ||
Sbjct 80853 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 80794
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| || || || |||||| || || || ||||| || ||||| ||||||||
Sbjct 80793 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 80734
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || |||| || || ||||| | ||||||
Sbjct 80733 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695
>seq2768
Length=91863
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||||||| ||| || || || ||||| ||| || || |||||||| ||||||||
Sbjct 13958 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTG 14017
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| |||||||| | || || ||||| || || || || || || || ||||| ||
Sbjct 14018 CTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTT 14077
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| |||||||||||||| || || || || |||| |||||||| ||
Sbjct 14078 GGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCTTTCCAGT 14137
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| || || ||||| | |||||
Sbjct 14138 CAGGGTCTTGACGAAAATCTGCAT 14161
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| || | |||||||| || || || |||||||| | || || | ||||| ||
Sbjct 14180 AACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCCTC 14239
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| || || ||||| || || |||||
Sbjct 14240 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 14299
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| || || || ||||| || ||||| ||||||| |||||
Sbjct 14300 GATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTCTT 14359
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | || || ||||| | ||||||
Sbjct 14360 TCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389
Score = 127 bits (140), Expect = 5e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || |||||||| || ||||| ||||| || | || || | || || || | ||||
Sbjct 14415 TGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAACTGC 14474
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || || ||||| || || || ||||| || ||||| || || ||||||||||| ||
Sbjct 14475 TTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGAATCTTC 14534
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| |||||||| || || |||||| || || |||| |||||| || ||
Sbjct 14535 GACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTGCCAGTA 14594
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| ||| || || || | |||||
Sbjct 14595 AGAGTCTTGACAAAAATCTGCAT 14617
Score = 111 bits (122), Expect = 3e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || ||||| ||||| || | ||||| | || || || |||||
Sbjct 14642 GTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTG 14701
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || ||||| || || || || ||||| ||||||||||| || ||||| || || ||
Sbjct 14702 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 14761
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || |||||||| || ||||| || | || | ||||| || ||
Sbjct 14762 CGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGT 14821
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 14822 GAGGGTCTTGACGAAGATCTGCAT 14845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109437163181642
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |