Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq2808 147 5e-30 seq2768 143 6e-29 >seq2808 Length=116519 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||||| || | ||||||||||||||| || || || ||||| || | ||| || | Sbjct 80913 GAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 80854 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || || ||||||||||| || |||||||| || || || ||||| || ||||| || || Sbjct 80853 GCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 80794 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || |||||| || || || ||||| || ||||| |||||||| Sbjct 80793 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 80734 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | |||||| Sbjct 80733 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 >seq2768 Length=91863 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||| ||| || || || ||||| ||| || || |||||||| |||||||| Sbjct 13958 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGAGCTG 14017 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| | || || ||||| || || || || || || || ||||| || Sbjct 14018 CTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTT 14077 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| |||||||||||||| || || || || |||| |||||||| || Sbjct 14078 GGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAGAGTAATGGTCTTTCCAGT 14137 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 14138 CAGGGTCTTGACGAAAATCTGCAT 14161 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || | |||||||| || || || |||||||| | || || | ||||| || Sbjct 14180 AACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCCTC 14239 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || || || ||||| || || ||||| || || ||||| Sbjct 14240 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTG 14299 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || || || ||||| || ||||| ||||||| ||||| Sbjct 14300 GATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTCTT 14359 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | || || ||||| | |||||| Sbjct 14360 TCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || |||||||| || ||||| ||||| || | || || | || || || | |||| Sbjct 14415 TGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAACTGC 14474 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| || || || ||||| || ||||| || || ||||||||||| || Sbjct 14475 TTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGAATCTTC 14534 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| |||||||| || || |||||| || || |||| |||||| || || Sbjct 14535 GACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTGCCAGTA 14594 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || || || | ||||| Sbjct 14595 AGAGTCTTGACAAAAATCTGCAT 14617 Score = 111 bits (122), Expect = 3e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||| ||||| || ||||| ||||| || | ||||| | || || || ||||| Sbjct 14642 GTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTG 14701 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || ||||| || || || || ||||| ||||||||||| || ||||| || || || Sbjct 14702 CTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTT 14761 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || |||||||| || ||||| || | || | ||||| || || Sbjct 14762 CGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGT 14821 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 14822 GAGGGTCTTGACGAAGATCTGCAT 14845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109437163181642