Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2768 125 5e-24 seq2808 98.7 8e-16 >seq2768 Length=91863 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| ||| || ||||| ||||| || || || | || |||| ||| Sbjct 14409 ACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 14468 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 |||||||| || ||||| ||||| ||||| || |||| ||||| ||||||||||| | Sbjct 14469 AACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCTTGA 14528 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | |||||||| | ||||||||| || Sbjct 14529 ATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 14588 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || |||||||||||||| Sbjct 14589 CCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| || ||||| ||||| ||||| ||| | || |||| || Sbjct 14637 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCA 14696 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || ||||| ||||| || || | |||| |||||||||||| Sbjct 14697 AGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 14756 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | | || || | ||||||||||| || || || || Sbjct 14757 ATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTG 14816 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| | || || || || |||||||| Sbjct 14817 CCCGTGAGGGTCTTGACGAAGATCTGCAT 14845 >seq2808 Length=116519 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || || ||||| || || || | || |||| || Sbjct 80903 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 80844 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || ||||| ||||| || |||| ||||| ||||||||||| Sbjct 80843 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 80784 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | || || |||| ||||||||| | || || || || Sbjct 80783 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 80724 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||||| || || || || || ||||| Sbjct 80723 CCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380923086991698