Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2931 107 6e-18 seq3078 100 8e-16 seq3091 98.7 3e-15 seq3084 86.0 2e-11 >seq2931 Length=79620 Score = 107 bits (118), Expect = 6e-18 Identities = 570/904 (63%), Gaps = 15/904 (2%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||||||| ||| ||||| || || |||||| || | ||||||||||| Sbjct 58795 GTACTCGACAATCTCTGTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTT 58736 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || | ||| |||||||||||||| || ||| | ||| |||||||||| |||| | Sbjct 58735 GCTCTTGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCGGTCTGAGA 58676 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809 || ||||| ||| || | | || || || |||| | || ||| Sbjct 58675 CTCGAGAATGGAGTACCAAAGCTTCTGAGCCTTGATGGTCTTGCGACCCTTACCCTCCTT 58616 Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || | || || | ||| | | | || || |||||| || || ||||||| Sbjct 58615 CTCGTAGCTCTCGTAGAGAGCCT--CGAACTCATCGCCGTAAACGTCTGCCAATCCAGGG 58558 Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924 || | | |||||| | || | ||| || || | ||||||| ||| || Sbjct 58557 CATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTC---AACACGCTTCATGAAG 58501 Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC-TCCTCATCGCCGTG 155983 | ||| ||| | ||| ||||| | ||| | | | ||| ||||| | ||||| Sbjct 58500 AGATCCGGGATCCAGAGAGCGTAGAACAAGTCAC-GGGCACGGACTTCCTCCTTTCCGTG 58442 Query 155984 ATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGC 156043 ||||| | | || | ||| || | ||| | || |||||| | || || || Sbjct 58441 GTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGC 58382 Query 156044 AAAACTACCA---TTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGAC 156100 ||| |||| | | |||||||| || || || |||| ||||| || |||||||| Sbjct 58381 GAAAGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTACCTCGCAGTGTTGTTGAAGAC 58322 Query 156101 ACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGA 156160 | ||||| |||| ||||| ||||| | || ||||| ||| ||| | | ||||| Sbjct 58321 GCGGAGCATGGGAACGATACCGTTGGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGT 58262 Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220 | || | | ||| || | | ||| ||||| || | || || || || || Sbjct 58261 GGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACA 58202 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280 | ||| | || | | | ||||| |||||| ||| || | ||| | | |||| Sbjct 58201 TGTCTTGAGTGTGTCGTAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCA 58142 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 || | || | ||||||| ||||| ||||| ||||| || | || || | || Sbjct 58141 GGATGAGAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA 58082 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAAT 156400 || || |||||| | ||||||||| | ||||||| | || |||||||| Sbjct 58081 GTATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCGATATCCTCGCCGTGAAT 58022 Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460 | | | || | ||| ||| ||||| || | ||| ||| | ||||||| || Sbjct 58021 GCCCACCGCAACACGCATAATCATGTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGGCG 57962 Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTT 156520 ||||| || | || || || || || || || || || | | |||||||||| Sbjct 57961 GAGAAGATACGATCGCTCAAGGGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTC 57902 Query 156521 GTAA 156524 |||| Sbjct 57901 GTAA 57898 >seq3078 Length=65249 Score = 100 bits (110), Expect = 8e-16 Identities = 237/353 (67%), Gaps = 4/353 (1%) Strand=Plus/Plus Query 133307 gAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATAT 133366 |||||||| ||| || || | || || ||| || || ||||| | ||||| Sbjct 48748 GAAGCCCGCTGCTTCTACGGTTTCCAAATCATGATTGAGAACATCCACGCCGAGACATAC 48807 Query 133367 TCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAACGC 133425 || || || || || |||||||| || | || | ||||| || | ||||| || Sbjct 48808 TCCCTCCTCATCGACACATACATCAAGGAGCAGGCTCA-ACGCACATACCTCTTCAATGC 48866 Query 133426 CATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484 ||| | || ||||||| || || ||||| | |||||||| | | |||||||| | Sbjct 48867 CATC-GAGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTCAGGTGGATCCAAG 48925 Query 133485 ACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttt 133544 ||||| | | | ||||| ||||||||||| || || | || ||||| || || | Sbjct 48926 ACAAGGATTCTACCTTTGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCT 48985 Query 133545 tCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604 || || | ||| || ||||| ||||| || ||||||||| | | |||| ||| Sbjct 48986 TCTCCGGCTCCTTCGCGTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTGA 49045 Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 || || ||||| || || || | ||||||| || ||||| || || ||| Sbjct 49046 CCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTCCACACTGACTTCGCC 49098 >seq3091 Length=56852 Score = 98.7 bits (108), Expect = 3e-15 Identities = 106/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| |||||||| ||||||||| Sbjct 11015 AGAATTTCCTTGAGACGTGGTACACCAAGGGTGACGTT---CTTGGACGACACACCAGCA 10959 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || ||||| ||||| || || | || |||| |||||||||||| || || |||| Sbjct 10958 AAATGGAAGGTATTGAGCGTCATCTGCGTAGCAGGCTCACCAATAGACTGGGCGGCAAGA 10899 Query 301933 ATACCAACCATTTCTCCTGG 301952 ||||| ||||| || || || Sbjct 10898 ATACCCACCATCTCGCCAGG 10879 >seq3084 Length=47395 Score = 86.0 bits (94), Expect = 2e-11 Identities = 112/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| ||||| || ||||| || ||||| | ||| || | Sbjct 7018 TGAGCAATCGTCATACGGGAAGGAATGGCGTGGGGGTTAATGATCAGGTCAGGCACAATA 6959 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTT 251955 || || |||||| |||||||||| ||| | ||| || | ||||| |||||||| Sbjct 6958 CCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTGATACCAATTGTTCCCTTC 6902 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||||| ||||||||||||||| Sbjct 6901 TGTCCGTGACGAGAGGCGAACTTATCACCAAT 6870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471758650945462