Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3078 145 9e-29 seq3046 141 1e-27 seq2861 131 2e-24 seq2931 125 9e-23 seq2937 86.0 8e-11 >seq3078 Length=65249 Score = 145 bits (160), Expect = 9e-29 Identities = 210/288 (73%), Gaps = 9/288 (3%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | |||||| |||| ||||| | |||||| || ||||| Sbjct 49080 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGACCACGCTT 49021 Query 869239 CTTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 ||||||||| || |||| ||| ||| ||| ||||| ||||| ||||| |||||||| | Sbjct 49020 CTTGAGCCAGAAAATGGACGC-GAAGGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGA 48962 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCC 869356 || | | ||| |||| ||||||| || || || | |||| ||||||| | | ||| Sbjct 48961 AGGCAACGAGACGCTGGGCAAAG--GTAGAATCCTTGTCTTG--GATCCACCTGACTGCC 48906 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCCTT 869415 ||||||||||| ||| | | | || | || |||||||| ||||||| || | Sbjct 48905 CAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC-G 48847 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||| | ||||||| || |||||||| ||||| || || ||||| Sbjct 48846 TTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTC 48799 Score = 118 bits (130), Expect = 1e-20 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| ||| | || ||| |||||| ||||||||||| || | || ||||| |||||| Sbjct 49386 GTAGTCGGCGACACGCTTCTCGAAGAAGTTGGTCTTTCCTGCCAGGGAGATGTTCTCCAT 49327 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| || |||||||| ||| ||| ||||| || ||||| | Sbjct 49326 GAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTGCCGAGGGAGAGCAGCAGCCT 49267 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||||||| ||||| ||||| || ||| | | |||||||||||||| || || Sbjct 49266 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGGGCACA 49207 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGA 868931 || || | ||| ||| ||||| | |||||| ||| |||||| ||||| Sbjct 49206 GGGAAGAGCCTCTGTCAAGAACTCCTGCTCGATGGTGACAGCCTCGGTGATGA 49154 >seq3046 Length=33126 Score = 141 bits (156), Expect = 1e-27 Identities = 139/177 (79%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 1592119 CGACATCTCGCCGTGGGACAAGGAGTTT-TGCGACGTCGAGCAGCCCACCCTCTTTGAGT 1592177 ||||||| | ||||||| || |||| ||| | ||||| ||| | || || ||| Sbjct 31103 CGACATCGAGGAGTGGGACCAGAAGTTCATGC-AGGTCGACCAGGAGATGCTGTTCGAGA 31045 Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 | |||||||| |||||||||||||||||||||| |||||||| | || |||||| | | Sbjct 31044 TCATCCTCGCATCCAACTACCTCGACATCAAGCCCCTGCTCGACGTCGGCTGCAAGACCG 30985 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 |||| |||||||||||||||||| || ||||||||| | ||||| || ||||||| Sbjct 30984 TGGCGAACATGATCAAGGGCAAGAGCCCAGAGGAGATCAGGAAGACGTTCAACATCA 30928 >seq2861 Length=44758 Score = 131 bits (144), Expect = 2e-24 Identities = 268/396 (68%), Gaps = 8/396 (2%) Strand=Plus/Minus Query 18096 CTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCCGCCGTGCA 18154 || |||||||||||| | || || | || |||||| |||| ||| || || | | Sbjct 14991 CTATGGCGAGTCGCATTGT-CGTTCGGTGGGATGCATCGTCGATGGCTGCCCTCCAGGAA 14933 Query 18155 TGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCG 18214 || || |||| ||||| |||||||||||| || ||| ||||| || |||||| ||| Sbjct 14932 TGGAGCTCACCGAAGCCGATATCCAGCCTCAGATGACTCGTCGCCGGCCCGGCCAGAGCG 14873 Query 18215 CACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACG 18274 | | | ||||| ||| ||||| || | ||| ||||| || ||||| ||| || Sbjct 14872 CCTTGACGACGCCCCGCGACGAGAAGGACCAGGTCGAAATCCACTCCGGCACCGAGTTCG 14813 Query 18275 GCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCG 18334 || |||| || ||| | ||| ||||| | | || ||||| |||||||| ||| | Sbjct 14812 GCGTCACCCTGGGCACCCCCATCGGCATGCTCGTTCGCAACCAGGACCAGCGCCCCAAGG 14753 Query 18335 ACT------ATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACA 18388 ||| | ||| |||| | | | || || || || || ||||||| || ||| Sbjct 14752 ACTACGGGAACTCCACCATGGACCTGTTCCCACGACCATCGCATGCCGACTGGACATACC 14693 Query 18389 TGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGCGAGACCC 18448 | | ||||| ||| ||||||| ||||| || ||||| || || ||||||||| Sbjct 14692 TCGAGAAGTATGGCGTCAAGGCCAGTTCGGGTGGTGGCCGCAGCTCCGCGCGCGAGACCA 14633 Query 18449 TCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAAT 18484 | | | || || || || ||| | || || |||| Sbjct 14632 TTGGGAGAGTGGCTGCGGGTGCGATTGCTGATAAAT 14597 Score = 120 bits (132), Expect = 4e-21 Identities = 120/155 (77%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 19038 CGCCAAGAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGC 19097 |||||||| ||||||||| ||||| || || ||||| | ||||| || ||| Sbjct 14369 CGCCAAGA---CAGCATCGGTGGCACCGTCACCTGCGTCATCAGGAACGTCCCAAGCGGC 14313 Query 19098 CTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATC 19157 ||||||||||| ||||| |||||||| || ||| |||||||||||||||||| ||| Sbjct 14312 CTCGGCGAGCCCTGCTTCGACAAGATGGAAGCCATGCTCGCCCACGCCATGCTCAGCATC 14253 Query 19158 CCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 || ||||||||||| || ||||| ||| ||| || Sbjct 14252 CCCGCCACCAAGGGCTTTGAGATCGGCTCCGGCTT 14218 >seq2931 Length=79620 Score = 125 bits (138), Expect = 9e-23 Identities = 184/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| ||||| | ||| |||| ||| ||||||||||||||||| |||| |||||||| Sbjct 58353 TGGTCAACGTACCTCGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTGGAG 58294 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | |||||||| || || | ||| || || | ||| || | || | || ||| Sbjct 58293 TTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 58234 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | ||| ||||| | || || ||| ||||| ||||||||||| ||||| Sbjct 58233 ATACCTCCGGCAGTCTTTGAGATCATGGCACA-TGTCTTGAGTGTGTCGTAGATACCCTC 58175 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || || |||||||||| || | ||||| || ||| || | || | || || Sbjct 58174 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGAGAGCTGGGCCTGTGGTGTACC 58115 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 || |||||||| || || Sbjct 58114 AGCATTGAAGAGTGTTGG 58097 >seq2937 Length=97206 Score = 86.0 bits (94), Expect = 8e-11 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1574067 GGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAG 1574126 |||||||| ||| | |||| ||||||||||||||| | | || || | ||||| ||| Sbjct 46971 GGACGCCAAAAGCTTGTCATTCTCGACGAGGCCGACAGTATGACATCTGGTGCCCAACAG 47030 Query 1574127 GCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAAC 1574186 ||||| || ||||||||| | || | || || ||||| || | || |||||| Sbjct 47031 GCCCTACGTCGCACCATGGAGATCTACTCTTCGACTACCCGCTTCGCATTCGCATGCAAC 47090 Query 1574187 ACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTG 1574241 ||| | | |||||||| | || ||| || ||||||||| |||||| || Sbjct 47091 CAGTCCAACAAGATCATCGAGCCTCTGCAATCGCGTTGCGCCATTTTGCGCTATG 47145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106882665800942