Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2768 125 6e-24 seq2808 122 8e-23 >seq2768 Length=91863 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||| ||||||||||| || | | Sbjct 14391 CCACCACGAAGGCGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 14450 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| |||| |||||| || ||||| |||| ||||||||||||| ||| Sbjct 14451 AGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 14510 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | ||||||||| ||||| ||| | |||| | | || ||| |||||||| Sbjct 14511 ATACCCTCCTTGTCTTGAATCTTCGACTTGA-CGTTGTCAATGGTATCGGATGATTCCAC 14569 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||| ||||| || || || | ||| || ||||| |||||||| Sbjct 14570 CTCGAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 125 bits (138), Expect = 6e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | || || |||| || |||||||| ||||| || Sbjct 14654 CTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAA 14713 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||||| || |||||||||| |||||| ||||| | | Sbjct 14714 AATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATT 14773 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||||| ||||| || || ||||| | || || || Sbjct 14774 ATCGATGGTGTCGGATGACTCCACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 14833 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 14834 GAAGATCTGCAT 14845 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||||| || |||||||| ||| | Sbjct 13935 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 13994 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | | | || || ||||||||||| || || ||||| ||||||||||||| || Sbjct 13995 AGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGG 14054 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| ||||| ||| | |||| | | ||||| ||| || || Sbjct 14055 ATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGACGACTCAAC 14113 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || || || |||| || || || || |||||||| Sbjct 14114 CTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | || | |||||| || |||||| || ||||||||||| | | Sbjct 14163 CCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGAC 14222 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| ||||| || |||| ||||||||||||| || Sbjct 14223 AGGGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGG 14282 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||| || |||||| ||| | |||| | | ||| || ||| || || Sbjct 14283 ATGCCCTCCTTATCTTGGATCTTAGACTTGA-CGTTGTCGATCGTATCCGACGACTCGAC 14341 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| || || || || || || | || || || || || ||||| Sbjct 14342 TTCCAGGGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 >seq2808 Length=116519 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | |||| ||||| || | || |||||| || |||||||| || | Sbjct 80921 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 80862 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || || || |||| ||||||||||||| ||| Sbjct 80861 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 80802 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | |||||| ||| |||||| Sbjct 80801 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 80742 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||||| || ||||| || || ||||| Sbjct 80741 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450775985240080