Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2931 268 1e-66 seq3078 109 7e-19 >seq2931 Length=79620 Score = 268 bits (296), Expect = 1e-66 Identities = 1172/1816 (65%), Gaps = 55/1816 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATA-TGCATAGAAGA 110421 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 59712 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTGCATGGATGT 59654 Query 110422 GAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATG 110479 || |||| ||| ||||| | |||| || ||| | ||| |||| | || || Sbjct 59653 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT--GATCGATA 59596 Query 110480 AAGCGCCCCCGTTGTGCCGCCATATCAATGACATCCTTCA-TCTTA-ATTTCCCAAACTG 110537 ||| || || | || ||||| | | || | | | | | || ||||| || | Sbjct 59595 AAGGCTCCACGGTCAGCAGCCATCTGGACGA--TGGTGCGCTGGGAGATCTCCCAGACGG 59538 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCG 110597 | ||||| |||||| || | ||||| | | ||| |||||||||||||| || | Sbjct 59537 TCTTGTAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTCTGGATGGAACCTCC-G 59479 Query 110598 CCTTC-ACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTG 110656 || | | ||| | | |||||| | | ||||| ||||| || | | ||| ||| Sbjct 59478 TCTGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATGTCGACCAAGTCCTTG 59419 Query 110657 A----CGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGAT 110712 | | ||| | ||||||| ||||| || || ||| | | | |||||| Sbjct 59418 AGCAACCAGGGG----TTGACAACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGAT 59363 Query 110713 GTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATT-TGTGCGGTGGAGGCTG 110771 ||| | ||||| || || ||||| || || |||| ||| | || | |||||| || | Sbjct 59362 GTTCGAGGTGTACGGCTCGAAGCACTCGTTGA-ACCCGAGAATCTGGGAGGTGGAAGCAG 59304 Query 110772 TTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGA 110831 | ||||| ||||| | | || ||| || | ||| | || |||||| | |||||| Sbjct 59303 TGGGCATGGGTGCAACGAGCAGGGAGTTGCGGATACCGTGCTGCTTGATCTGGGCCTTGA 59244 Query 110832 GAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACC 110890 || |||||||| | | | | || | || |||||||||| | || ||| | Sbjct 59243 GAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATGTCGTATTGGAGCTCG 59185 Query 110891 CCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCA 110950 || | |||| | ||||| ||||| |||| || || | || || | |||| ||| Sbjct 59184 CCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTATGGGCCGTGAATCTGGGCCAGCTCA 59125 Query 110951 CAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTG 111010 | || || | |||| || ||||| |||||||| | | || | | |||| Sbjct 59124 ACGGAGGCAGTAAGAGCACCGTGGTAAATGGTCTCAAAGATCTGGGAGTTGAGGTGCTTG 59065 Query 111011 GCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACA 111070 || || |||||||| | |||| | ||| |||| || ||||| || ||| Sbjct 59064 GCCTCGGGAGAATCAAAGGGAAGGCGGAGAGCCAAGAATGCATCAGCAAGACCCTGGACA 59005 Query 111071 CCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC---GCAGTCTCAACGGGATAA 111127 || | | ||| |||||||| || | || | ||| || ||| ||||| || Sbjct 59004 CCAACAGCAACTGGTCTGTGACGGAAGTTGC---TGCGCCTGGCCTCCTCGACGGGGTAG 58948 Query 111128 AAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGT 111187 | || || |||| ||| | || ||| ||||| || ||||| || || || Sbjct 58947 TAGTTGACCTCGATGATCTTGTTCAAGTTCTTGACAACAACCTGTGTGACCTCGTGGAGC 58888 Query 111188 TTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCC 111247 || | | || | |||| | | | ||||| |||| ||||| | ||| ||| Sbjct 58887 TTCTGGAAGTCGTAGGTGCCGTTGGCCATGTCAACATATGTTGGCAGGGCAAGTGACGCC 58828 Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307 || || || || ||| |||||| | | |||||| | ||| ||||| || | |||| Sbjct 58827 AAGTTACACACGGCCACCTCATCTGGAGAAGAGTACTCGACAATCTCTGTGCAAAGGTTG 58768 Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367 || || || || || | ||||| ||||| ||||| |||||| ||||||||||| Sbjct 58767 GAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAC 58708 Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGC 111426 |||||| | || | || ||||| ||||| || | |||||| | | ||||| | || | Sbjct 58707 AGCATGAAAGGGTTTCCTGTCTCGGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGA 58648 Query 111427 GGCTGGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTC 111483 | || | |||| ||| ||| | |||||| |||||| | |||||| || || Sbjct 58647 GCCTTG----ATGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGAGCCTC 58592 Query 111484 AAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACC 111542 ||||| || || |||| | | || || || || || || || | || | || Sbjct 58591 GAACTCATCGCCGTAAACGTCTGCCAATCCAGG-GCATTCGTTGGGGCACATGAGGGTCC 58533 Query 111543 ATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGA 111602 | | || | |||||| ||||||||||| || || || ||||| || | | || | Sbjct 58532 AGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACA 58473 Query 111603 GATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 111661 || | ||| || | || || | || ||||| || || || |||||||| | | Sbjct 58472 AGTCACGGGCACGGA-CTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAG 58414 Query 111662 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGC 111717 | |||||||||||||||||| | |||| |||| || || | | | ||| | | Sbjct 58413 ACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCC-ACC 58355 Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777 ||| | || || | ||| ||| ||| || ||||| ||||| |||| ||||| | || Sbjct 58354 TTGGTCAACGTACCTCGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTGGA 58295 Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 111837 | || || || || ||| | | |||| | | | |||||||| || || Sbjct 58294 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCC 58235 Query 111838 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 111897 ||||| || || ||||||||| ||||| | | || || | |||||||| | Sbjct 58234 GATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCGTAGATACCCTC 58175 Query 111898 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTAC 111956 || |||||||| || ||| | |||||| || | ||| || || |||||||| Sbjct 58174 AATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGAGAGCTG-GGCCTGTGGTGTAC 58116 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTA 112014 ||||||||||||| ||||| | ||||| |||| || |||| ||||| || ||| Sbjct 58115 CAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTA 58058 Query 112015 TGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACAT 112074 |||||| | || || || || ||||| ||||| | || || ||||| | ||| Sbjct 58057 TGTCTCGATTGTCTTCTCGATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 57998 Query 112075 GTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGG 112133 || |||||| | || | ||||||| || || ||||||| | || |||||||| Sbjct 57997 GTGCTGTGGCCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGATACGATC-GCTCAAGGG 57939 Query 112134 TTTTGAGACCAAAGTA 112149 | |||| |||||||| Sbjct 57938 TCTTGAAGCCAAAGTA 57923 >seq3078 Length=65249 Score = 109 bits (120), Expect = 7e-19 Identities = 333/509 (65%), Gaps = 7/509 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || ||||| || || || || |||||| || || | ||||||||| Sbjct 49086 GTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCAGCCATGAGACC 49027 Query 122730 CCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCCACAC 122788 |||||||| | ||| |||| | ||| ||| || |||||||||||||||||||| || Sbjct 49026 ACGCTTCTTGAGCCAGAAAATGGACGC-GAAGGAGCCGGAGAAGAAGATACCCTCAACGG 48968 Query 122789 ACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAACCATTTCATTG 122848 || || |||| || || | ||| |||| | ||| | | | ||| | | || Sbjct 48967 CGGCGAAGGCAACGAGACGCTGGGCAAAGGTAGAATCCTTGTCTTGGATCCACCTGACTG 48908 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 122908 |||| | |||||||||| || || || | || | |||||| | || | | | Sbjct 48907 CCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 48848 Query 122909 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 122968 || || ||||| |||||| |||| || | || ||||| ||| | || | Sbjct 48847 GTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGGATGT 48788 Query 122969 TTTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCG 123028 | ||| | | ||| | ||||||| |||| ||||| ||||| ||||| | | Sbjct 48787 TCTCAATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATCTGGACCTC-GCTG 48729 Query 123029 CAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 | || | | || ||||| |||||||| || ||| | || ||||| || || Sbjct 48728 CTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCAGACGCGGCGAAGAAAGCGAGA 48669 Query 123088 ATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCT 123144 | || ||||| | |||| || || | || | |||||||||| ||| || Sbjct 48668 ACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTTCCAGTCGTGAAGGTCC 48609 Query 123145 TTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| | |||| || || || ||||| Sbjct 48608 TTGGAGAGGTCAATCTCCTCTGCTGTCCA 48580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628007459649600