Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2931 295 8e-75 seq3078 140 4e-28 >seq2931 Length=79620 Score = 295 bits (326), Expect = 8e-75 Identities = 961/1461 (66%), Gaps = 35/1461 (2%) Strand=Plus/Plus Query 104156 TATTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGTGTC-TTGA 104213 || ||||| |||| ||||||||| || | ||||||| || || ||||| ||| Sbjct 57923 TACTTTGGCTTCAAGACCCTTGAGC-GATCGTATCTTCTCCGCCTTGATGGCAAGGTTGC 57981 Query 104214 TGGAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTG 104273 || | | |||||| ||||| | ||||| || || | || ||||| || || || || | Sbjct 57982 TG-AGAGGCCACAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATCG 58040 Query 104274 ATTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACC 104331 | | ||||||||| || ||||| |||| || |||| ||||| | || Sbjct 58041 AGAAGACAATCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCC 58098 Query 104332 AACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAA 104391 ||| ||||||||||||||||||||| |||| | || |||||| | ||| || Sbjct 58099 AACACTCTTCAATGCTGGTACACCACAGGCCCAGCTCTCATCCTGCTTCTTGGTCGACAT 58158 Query 104392 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 104451 |||||||| || | |||||||| | || || | | ||||| |||||||| Sbjct 58159 GAAGGAGGATAGTATTGAGGGTATCTACGACACACTCAAGACATGTGCCATGATCTCAAA 58218 Query 104452 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 104511 | || || ||||| || || |||||||| | | | |||| | | ||| Sbjct 58219 GACTGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACTGGTGCATACATTGC 58278 Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571 || || || || | || | ||||| |||| ||||| ||||| || ||| ||| || Sbjct 58279 CGGTACCAACGGAAACTCCAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGC 58338 Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627 | | || || | |||| ||| | | | | || || |||| |||| | |||| Sbjct 58339 GAGGTACGTTGACCAAGGTGG-CAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGC 58397 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 |||||||||||||| || | |||||||| || ||| | ||||| || | ||||| | Sbjct 58398 CATGGCACGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAAG 58457 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| || | |||| |||||||||||| || ||||||||||||||| | |||| Sbjct 58458 TCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTG 58517 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCC 104806 || ||| ||| | ||| | ||| | || || || || || ||||| | | || | Sbjct 58518 AGAAGAACGGCGACTGGACCCTCATGTGCCCCAACGAATGC-CCTGGATTGGCAGACGTT 58576 Query 104807 GTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC- 104865 || || ||||| || || || ||| | |||||| | || ||| || | | || Sbjct 58577 TACGGCGATGAGTTCGAGGCTCTCTACGAGAGCTACGAGAAGGAGGGTAAGG-GTC-GCA 58634 Query 104866 -GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 104923 ||| | | || | || | | ||| | | |||||| ||||||| |||||||| || Sbjct 58635 AGACCAT-CAAGGCTCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACCGAGACAGGA 58693 Query 104924 ACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 104983 | || | |||||| ||||| || || || |||| ||||| || || ||||| | ||| Sbjct 58694 AACCCTTTCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGT 58753 Query 104984 GTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACG 105043 ||| || ||||| || || ||||| || | || | | ||||||| | Sbjct 58754 ACCATCCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTTCTCCAGATGAGGTG 58813 Query 105044 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--A 105101 || ||||||||| | || ||| | || || || | ||||| || || | ||| | | Sbjct 58814 GCCGTGTGTAACTTGGCGTCACTTGCCCTGCCAACATATGTTGA--CATGGCCAACGGCA 58871 Query 105102 CATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAG 105161 | | || | | || |||||||| || || | ||| ||| ||| | |||| Sbjct 58872 CCTACGACTTCCAGAAGCTCCACGAGGTCACACAGGTTGTTGTCAAGAACTTGAACAAGA 58931 Query 105162 TTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTC 105221 | || || || | |||||||| ||| || | || | | ||| | | Sbjct 58932 TCATCGAGGTCAACTACTACCCCGTCGAGGAGGCCAGGCGCAGCAACTTCCGTCACAGAC 58991 Query 105222 CAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTG 105281 || ||| | | ||||| |||||||| || |||| |||| | | |||| | |||| Sbjct 58992 CAGTTGCTGTTGGTGTCCAGGGTCTTGCTGATGCATTCTTGGCTCTCCGCCTTCCCTTTG 59051 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 |||| ||| || ||| | |||| | | || ||||||||||| || |||| |||| Sbjct 59052 ATTCTCCCGAGGCCAAGCACCTCAACTCCCAGATCTTTGAGACCATTTACCACGGTGCTC 59111 Query 105342 TTGAGGC--GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 || || ||| ||| |||| || || | || ||||| || |||| ||||| || Sbjct 59112 TTACTGCCTCCGTT--GAGCTGGCCCAGATTCACGGCCCATACGAGACCTACGAGGGATC 59169 Query 105400 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCAC 105457 ||||| || |||||| | ||| |||| || ||||||| || | || | | | Sbjct 59170 TCCAGTGTC-CAAGGGCGAGCTCCAATACGACATGTGGG-GCGTTACTCCTACCGACCTG 59227 Query 105458 TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTC 105517 | |||||||| ||||||||| | |||||| || | ||| | || ||| || ||| Sbjct 59228 TGGGACTGGGACTCTCTCAAGGCCCAGATCAAGCAGCACGGTATCCGCAACTCCCTGCTC 59287 Query 105518 ATGGCTCCAATGCCAACAGCCTCCACCGCACA-AATCTTGGGTAATAATGAATGCTTTGA 105576 | || || ||||| || || |||||| | || | ||| |||| || || ||||| || Sbjct 59288 GTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGGT-TCAACGAGTGCTTCGA 59346 Query 105577 ACCCTACACGACGAACATCTA 105597 || ||||| |||||||||| Sbjct 59347 GCCGTACACCTCGAACATCTA 59367 >seq3078 Length=65249 Score = 140 bits (154), Expect = 4e-28 Identities = 174/233 (75%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | |||||| | || |||| || || | ||||| || || ||||| | | | Sbjct 48856 CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTCAGG 48915 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | | | ||||||| |||| ||| | || || || ||||| Sbjct 48916 TGGATCCAAGACAAGGATTC-TACCTTTGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGA 48974 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCA 94891 ||||||||||||||| || |||||| ||| | |||| |||||||||||||| ||||||| Sbjct 48975 GGGTATCTTCTTCTCCGGCTCCTTC-GCGTCCATTTTCTGGCTCAAGAAGCGTGGTCTCA 49033 Query 94892 TGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 || | || || ||||||||||||||| ||||| || |||||||| |||||| Sbjct 49034 TGGCTGGCCTGACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTCCAC 49086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583238009084240