Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2768 140 1e-27 seq2719 127 6e-24 seq3091 93.3 1e-13 >seq2768 Length=91863 Score = 140 bits (154), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| | ||| || || ||||| || ||||| || | Sbjct 14383 TTTGCATACCACCACGAAGGCGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGT 14442 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || | || || ||||||||||| || || ||||| | Sbjct 14443 AGTCCGACAGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGT 14502 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | || ||||| || || || || ||||| || | || || || ||||| | ||| |||| Sbjct 14503 CCGGGGGAATACCCTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTATCGGATG 14562 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || |||| ||||| || || || || || |||||||||||||| Sbjct 14563 ATTCCACCTCGAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||||||||| | || ||||| || || || || ||||| Sbjct 14159 CATACCACCACGGAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATC 14218 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || ||||| || || || || || || || || || || ||||| || || Sbjct 14219 AGACAGGGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGG 14278 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 || || || || ||||| || || |||| || || || || |||| ||| || | || Sbjct 14279 TGGGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTC 14338 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || |||| |||||||||||| || || || || || || ||||| Sbjct 14339 GACTTCCAGGGTAATTGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || ||||| ||||| || ||||| || || || Sbjct 14615 CATACCACCACGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTC 14674 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || ||||| || || || || || || || || ||||| ||||| Sbjct 14675 AGAGAGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGG 14734 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | || |||||||| || | || |||| || Sbjct 14735 AGGAATGCCCTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTC 14794 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | ||||| || || || || || || || |||||||| Sbjct 14795 CACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14845 Score = 107 bits (118), Expect = 6e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | |||||||| ||| || || || || || || Sbjct 13935 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 13994 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || | |||||| || || || || ||||| ||||| | ||| ||||| || || || Sbjct 13995 AGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGG 14054 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 || || || ||||||||||| || | || || || ||||| | || || | ||||| Sbjct 14055 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACC 14114 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || |||| |||||||| || || || || || ||||||||||| Sbjct 14115 TCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| || || || || || || Sbjct 14843 CATACCACCACGCAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 14902 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || ||||| || || || || ||||| ||||||||||| || || Sbjct 14903 GGAGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGG 14962 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||||| || || || || || || ||| || || || || || | ||| || | | Sbjct 14963 GGGAATTCCCTCCTTGTCTTGGATCTT-GCTCTTAACGTTGTCGATGGTATCGGAGGACT 15021 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGT 140713 | || ||||| || | ||||| || || Sbjct 15022 CGACCTCAAGGGTGATGGTCTTGCCAGT 15049 >seq2719 Length=63830 Score = 127 bits (140), Expect = 6e-24 Identities = 451/702 (64%), Gaps = 11/702 (2%) Strand=Plus/Minus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || || |||||||| ||||| || || || || || | | | | | |||| || | Sbjct 45420 ATCGGTATCGATTTGGGTACCACCTACTCGTGCGTGGGTATCTTCAGAGATGACCGCATT 45361 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || || ||||| || || || || ||| | ||||| || || | |||||| || || || Sbjct 45360 GAGATTATTGCCAACGACCAGGGCAACCGCACAACCCCCTCGTTCGTTGCCTTCACTGAC 45301 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 || |||||| |||| |||||| | || || || |||| || || |||| || || Sbjct 45300 ACCGAGCGTCTGATCGGTGATGCCGCCAAGAACCAAGTCGCCATGAACCCAACCAACACC 45241 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACACAATC 349437 || || || || ||||| || || ||| | | || | ||| | || || | Sbjct 45240 GTCTTCGACGCCAAGCGTCTGATCGGTCGCAAGTTCGCCGACGCTGAGGTC----CAGGC 45185 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | || || || || || | | | || | ||| || | || ||| | | Sbjct 45184 CGACATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGAGGCAAGCCAGTCTGCCA 45128 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| || | || || || || | || |||||| || || || || ||| | | Sbjct 45127 GGTCGAGTTCAAGGGCGAGACCAAGGACTTCACACCCGAGGAGATCTCCTCCATGATCCT 45068 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || || ||| || | ||||| || || | |||| ||| || | | || ||| | Sbjct 45067 CGTCAAGATGCGCGAGACCGCTGAGGCCTACCTCGGTGGAACCGTCAACAACGCCGTTGT 45008 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || || || || || || || |||||||| || || || ||||| || ||| Sbjct 45007 CACCGTCCCCGCTTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTCTCAT 44948 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || | || || || | || || || || || || || || || || || || || Sbjct 44947 TGCCGGACTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATCGCCTACGG 44888 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 ||||| || | | || || || | || || || ||| | |||||||| || Sbjct 44887 TCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTTGGTGGTGGAAC 44828 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 ||| ||||| || || || || | || ||||| || || || || || | |||||||| Sbjct 44827 TTTCGATGTCTCTCTCCTTACCATCGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCTGG 44768 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 ||| || || | ||||| || || || || || |||||||| Sbjct 44767 TGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTCGT 44726 >seq3091 Length=56852 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 ||||| |||||| | || || ||| || || | ||||||||||| ||||| ||||| Sbjct 11000 CGTGGTACACCAAGGGTGACGTTC---TTGGACGACACACCAGCAAAATGGAAGGTATTG 10944 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | || |||| ||||||||||| ||||| || |||| || || ||||| || Sbjct 10943 AGCGTCATCTGCGTAGCAGGCTCACCAATAGACTGGGCGGCAAGAATACCCACCATCTCG 10884 Query 377578 CCAGGATTGACAATAGC 377594 ||||| ||||| | ||| Sbjct 10883 CCAGGGTTGACCAGAGC 10867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515193711220178