Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2931 214 2e-50 >seq2931 Length=79620 Score = 214 bits (236), Expect = 2e-50 Identities = 478/712 (67%), Gaps = 22/712 (3%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAG--CCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCA 53300 ||||| ||| || | ||| ||||| ||||| || ||||| | ||||| || |||| Sbjct 58052 GAGACATACAACCTCATGTCTTCCAAA--TACTTCACACACGCTTCCCCAACACTCTTCA 58109 Query 53301 ACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACT 53360 | |||||||| || | ||| | || ||||||| |||| | |||||||| || Sbjct 58110 ATGCTGGTACACCACAGGCCCAGCTCTCATCCTGCTTCTTGGTCGACATGAAGGAGGATA 58169 Query 53361 CGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTG 53420 || || || |||||||| || |||||| |||||| ||||| ||| | || | Sbjct 58170 GTATTGAGGGTATCTACGACACACTCAAGACATGTGCCATGATCTCAAAGACTGCCGGAG 58229 Query 53421 GTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAA 53478 ||||||| | || | ||| | ||||||| | || || || || || || Sbjct 58230 GTATCGGATTGAACATCCATCGTA--TCCGTGCCACTGGTGCATACATTGCCGGTACCAA 58287 Query 53479 CGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGT 53538 ||| | || | || ||||| || ||||||||||||||||||||||| || ||||||| Sbjct 58288 CGGAAACTCCAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCGAGGTACGT 58347 Query 53539 CAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGC 53598 |||| ||||| |||||| || | |||||||||||| ||||||| |||||||| Sbjct 58348 TGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCATGGCACGC 58407 Query 53599 CGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCG 53658 || | | ||||| || || || | ||| || || | || || | || ||| Sbjct 58408 GGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGAAAGGAGGAAGTCCGTGCCCG 58467 Query 53659 TGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 |||| |||| ||| ||||| ||||| ||||| ||||||||| | || |||||| ||| Sbjct 58468 TGACTTGTTCTAC-GCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAACG 58526 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGG 53777 || ||| ||| |||||||| ||||| ||||| || | | || ||||| || | Sbjct 58527 GCGACTGGACCCTCATGTGCCCCAACGAATGCCCTGGATTGGCAGACGTTTACGGCGATG 58586 Query 53778 AGTTTAACGAGATGTATCGGACGTAC------GCAGTTCAGGGCCGCTACAAGAAGAAGG 53831 |||| | | | || || ||| | | | |||| ||| |||| Sbjct 58587 AGTTCGAGGCTCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGTCGC------AAGACCA 58640 Query 53832 TCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGT 53891 ||||||| | || | ||| | | || ||| || ||| ||||| |||| || | Sbjct 58641 TCAAGGCTCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACCGAGACAGGAAACCCTT 58700 Query 53892 ACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943 |||| ||||||||| | |||| |||||||||||||||||| |||| Sbjct 58701 TCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 58752 Score = 107 bits (118), Expect = 2e-18 Identities = 300/451 (67%), Gaps = 17/451 (4%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 ||||||||||||||||| || || ||||| || || || || | ||||| | || | Sbjct 59273 CGCAACTCCCTGCTCGTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGGTTC 59332 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 |||||| |||||||||||||| | ||||||||| |||||| ||| || || ||| Sbjct 59333 AACGAGTGCTTCGAGCCGTACACCTCGAACATCTACTCGCGCCGTGTCCTGGCTGGCGAG 59392 Query 55604 TTTGTCATGATCAACAAGCACCTCGT----CAAGGACCTGCAGAAGATCAACAAGTGGAA 55659 || | ||||| ||| || ||||||| || | || |||| Sbjct 59393 TTCCAAGTTGTCAACC----CCTGGTTGCTCAAGGACTTGGTCGACATGGGTCTGTGGTC 59448 Query 55660 CCCGCAGATCAAGA--CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGA 55715 | || |||| || || | || || ||| || ||| ||||||| || | Sbjct 59449 TGACAACATGAAGAACCGCATCATC-GCAGA-CGGAGGTTCCATCCAGAACATCCCCAAC 59506 Query 55716 TTCCTCTGC-GTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCT 55773 ||| |||| | | |||||| | ||| ||| || |||||||| | ||| | | Sbjct 59507 ATCC-CTGCCGACATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGCACCAT 59565 Query 55774 GATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833 | | ||| |||||| ||||| || | ||||| ||||||||||| || |||||| Sbjct 59566 CGTCCAGATGGCTGCTGACCGTGGAGCCTTTATCGATCAGTCCCAGTCCCTCAACATCCA 59625 Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893 |||| || | || || ||| |||| | | || ||||||||| || |||||| || Sbjct 59626 CATGAAGGACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGCTGGAAGCTCGG 59685 Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACC 55924 |||||||| || |||||||| || || ||| Sbjct 59686 CCTCAAGACCGGCATGTACTACCTCCGTACC 59716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547194617534800