Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2931 269 3e-67 seq2808 167 3e-36 seq2768 167 3e-36 seq2512 131 2e-25 seq3078 98.7 1e-15 >seq2931 Length=79620 Score = 269 bits (298), Expect = 3e-67 Identities = 809/1234 (66%), Gaps = 25/1234 (2%) Strand=Plus/Minus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 ||||||||||||| || | ||||| ||| | ||||| ||| || | |||||||| Sbjct 59208 CCCCACATGTCGTATTGGAGCTCGCCCTTGGACACTGGAGATCCCTCGTAGGTCTCGTAT 59149 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658 ||||| | ||| |||||||||| || | |||| || |||| |||||| |||| Sbjct 59148 GGGCCGTGAATCTGGGCCAGCTCAACGGAGGCAGTAAGAGCACCGTGGTAAATGGTCTCA 59089 Query 80659 AAGACGCCCTTGTTCACACCGCGC---GCCTGTGGGTCGTCGAACGACAAGCCCATCATC 80715 |||| ||| | | || |||| || || || | | || | | Sbjct 59088 AAGATCTGGGAGTTGAG---GTGCTTGGCCTCGGGAGAATCAAAGGGAAGGCGGAGAGCC 59032 Query 80716 ATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGAT 80775 | ||| | ||||| || ||||| || || | || | || | ||| || ||| Sbjct 59031 AAGAATGCATCAGCAAGACCCTGGACACCAACAGCAACTGGTCTGTGACGGAAGTTGCTG 58972 Query 80776 CGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT- 80834 ||| ||||||| | ||||| |||| ||||||| ||||| ||| | || Sbjct 58971 CGCCTGGCCTCCTCGACGGGGTAGTAGTTGACCTCGATGATCTTGTTCAAGTT-CTTGAC 58913 Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAAT-TG--GTTCCCCTTCACAA- 80890 ||||||| |||| || || || || ||||| |||||| | || ||| || | ||| Sbjct 58912 AACAACCTGTGTGACCTCGTGGAGCTTCTGGAAGTCGTAGGTGCCGTTGGCCATGTCAAC 58853 Query 80891 --ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAA 80948 ||| || ||| || ||||||| || |||||||||||||| || | | | | Sbjct 58852 ATATGTTGGCAGGGCAAGTGACGCCAAGTTACACACGGCCACCTCATCTGGAGAAGAGTA 58793 Query 80949 CTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGA 81008 |||||| || || ||||| | || || || ||||| ||||| |||||||| Sbjct 58792 CTCGACAATCTCTGTGCAAAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCT 58733 Query 81009 CTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTT 81068 |||| ||||||||| |||||||| |||| | ||| | || |||||| ||| |||| Sbjct 58732 CTTGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCGGTCTGAGACTC 58673 Query 81069 GAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCAC 81128 ||| |||| || ||||| || | ||||||| |||||| || || || | | Sbjct 58672 GAGAATGGAGTACCAAAGCTTCTGAGCCTTGATGGTCTTGCGACCCTTACCCTCCTTCTC 58613 Query 81129 ATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTC 81188 || | |||| | ||||||| | |||| || || | | | ||||| || Sbjct 58612 GTAGCTCTCGTAGAGAGCCTCGAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTC 58553 Query 81189 GTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGG 81248 ||| |||||||| ||| ||||||| || ||||| ||| ||||||||| || || Sbjct 58552 GTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGG 58493 Query 81249 GATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCG 81308 ||||||||| ||| ||||| ||| ||| || | ||||| | || ||||| | Sbjct 58492 GATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCT 58433 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 ||| || || || || | || ||||| ||||||||||| | || | ||||| | || Sbjct 58432 CAAGTCCAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACC 58373 Query 81369 CTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACAT 81425 ||| |||||| |||| ||||| | ||||| ||| || || || | ||| Sbjct 58372 AGGGCGCTTGTTGCCACCTTGGTCAACGTACCTCGCAGTGTTGTTGAAGACGCGGAGCAT 58313 Query 81426 AGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCG--C 81483 || | |||||| | || | ||||| ||||| | || | || |||| || Sbjct 58312 GGGAACGATACCGTTGGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGAT 58253 Query 81484 ACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTC 81543 || || ||| | ||||| || || | |||||| ||| ||||| || Sbjct 58252 ACGATG--GATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTG 58195 Query 81544 ATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGAC 81603 | || || || || ||||| || ||||| | |||||||| | |||||| ||| ||| Sbjct 58194 AGTGTGTCGTAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGAG 58135 Query 81604 ATCTGAGGGCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACG 81662 | ||| || || | || || |||||||| |||||||||| ||||| |||| || Sbjct 58134 AGCTG-GGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTT 58076 Query 81663 GTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721 | ||||| |||| || || || ||| | | | ||||| || |||||||| || | Sbjct 58075 GGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCG-ATATCCTCGCCGTGAATGCCCA 58017 Query 81722 TAGCTACACGCATAAACATGTACTGGGGCGTCTC 81755 || |||||||||| ||||| ||| ||| |||| Sbjct 58016 CCGCAACACGCATAATCATGTGCTGTGGCCTCTC 57983 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || || || ||||||||||| ||||||||||| ||||||||| | |||||| || Sbjct 59715 GTACGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGAT 59656 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 ||| ||| | | ||| |||| || |||| |||||| || ||||| |||||| ||| Sbjct 59655 GTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATA 59596 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || ||||| || || ||||| Sbjct 59595 AAGGCTCCACGGTCAGCAGCCAT 59573 >seq2808 Length=116519 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| || || ||||||||||| || |||||||| ||||| Sbjct 80695 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 80754 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || |||||||||||||||||||| || |||||| Sbjct 80755 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 80814 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 80815 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 80874 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||||||||| | ||| || | || || || || Sbjct 80875 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGG 80921 >seq2768 Length=91863 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| |||||||| ||||| || ||||| || ||| Sbjct 14617 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACGATTACGCTCGAGGTGGAATCATCC 14558 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||| | || ||||| ||||||||||| ||||| || |||||| Sbjct 14557 GATACCATTGACAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCCCCGGACCAG 14498 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || |||||||| ||||| | ||||| | || ||||| | ||||| || Sbjct 14497 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAAC 14438 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || ||| | || | || ||||| ||||| Sbjct 14437 ATTCAGAAGGAGTCCACCCTGCATTTGGTTCTCCGCCTTCGTGGTGG 14391 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || ||| | ||||| |||||| Sbjct 14845 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTGGAGTCATCC 14786 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||| | || || |||||||||||||| |||||||| |||||| Sbjct 14785 GACACCATCGATAATGTGAAGTCGAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 14726 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| || ||||| | || || || | ||||| || Sbjct 14725 CAGCGCCTGATTTTCGCGGGCAAGCAGCTTGAGGACGGCCGCACTCTCTCTGACTACAAC 14666 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||| || | ||| | |||||||| ||||| Sbjct 14665 ATTCAGAAGGAGTCGACTCTCCACTTGGTCCTTCGTCTTCGTGGTGG 14619 Score = 163 bits (180), Expect = 3e-35 Identities = 177/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| |||||||| ||||||||||| Sbjct 14161 ATGCAGATTTTCGTCAAGACCCTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCGTCG 14102 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || | ||| | || |||||||| |||||||| || || || |||||| Sbjct 14101 GACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 14042 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||| | || || ||||||||||| |||||||||| | || || ||| ||||| || Sbjct 14041 CAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGGAGGACGCTGAGC-GACTACAA 13983 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| ||||||||| | || | |||||||| ||||| ||| Sbjct 13982 CATCCAGAAGGAGAGCACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGCCAA 13931 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| ||||| || || || ||||| Sbjct 14389 ATGCAAATCTTCGTCAAGACCCTCACCGGAAAGACAATTACCCTGGAAGTCGAGTCGTCG 14330 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | ||| |||| || || || |||||||| || || || |||||| Sbjct 14329 GATACGATCGACAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGGACCAG 14270 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || ||||| || || ||||| |||||||||| |||||||| | || || || Sbjct 14269 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACCCTGTCTGATTACAAC 14210 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| | ||||| || | || || || ||||| Sbjct 14209 ATCCAGAAGGAGTCCACATTACATCTTGTTCTCCGCCTCCGTGGTGG 14163 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||| ||||| |||| ||| | || | ||| Sbjct 15049 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGAGC 14990 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||||||||||||||| || |||||||| ||||| || || || || ||| Sbjct 14989 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 14930 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||| | || ||||| | ||||| || |||| ||||| || || || || Sbjct 14929 CAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 14870 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 | ||| | ||||| || ||||| Sbjct 14869 TTGGTCCTCCGTCTGCGTGGTGG 14847 >seq2512 Length=28997 Score = 131 bits (144), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| | || |||||||| || || |||||||| ||||| |||| || Sbjct 21046 CTTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTAT 21105 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| | || || |||||||||||||||||||| || |||||||| || || Sbjct 21106 CGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCT 21165 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || ||||| ||||| || ||||||| || ||||| | ||||| || |||| || Sbjct 21166 GATCTTCGCTGGCAAGCAGCTTGAGGATGGACGCACCCTTTCCGACTACAACATCCAGAA 21225 Query 27594 GG 27595 || Sbjct 21226 GG 21227 >seq3078 Length=65249 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 |||| |||||||||| || || ||| || || || || ||||| || || || ||| Sbjct 48940 TTTGCCCAGCGTCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTC 48999 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 || ||||||||||| || ||||| || || ||| | || ||| | || || |||||| Sbjct 49000 GCGTCCATTTTCTGGCTCAAGAAGCGTGGTCTCATGGCTGGCCTGACCTTCTCCAACGAG 49059 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCAC 64854 || ||||| || |||||||| |||||| Sbjct 49060 CTCATCTCCCGCGACGAGGGTCTCCAC 49086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570288115121120