Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2768 93.3 3e-14 seq2808 91.5 9e-14 >seq2768 Length=91863 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| ||||| || |||||| || ||||| || || || || || || Sbjct 14856 AGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 14915 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || ||||| || || | ||| || |||||||| || | ||||||| Sbjct 14916 CCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCC 14975 Query 34609 TTGTCTGTGATCTT 34622 |||||| |||||| Sbjct 14976 TTGTCTTGGATCTT 14989 Score = 91.5 bits (100), Expect = 9e-14 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | |||||| || |||||||||||||| || ||||| || || Sbjct 13934 GCCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 13993 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || | | | || || || || ||||| || || || |||||||| |||||||| || Sbjct 13994 CAGCGTCCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGG 14053 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCA 34657 | |||||||| || ||||| | || ||| | ||| ||||| ||| | Sbjct 14054 GATACCCTCCTTATCCTGAATCTTG-GACTTGACGTTGTCAATGGTGTCCGACGACTCAA 14112 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | || || || || || || | || || || ||||||||||| Sbjct 14113 CCTCGAGAGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | |||||||| || ||| |||||| |||||||| || || || Sbjct 14391 CCACCACGAAGGCGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAC 14450 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || | || || || ||||| || | ||||| |||||||| || Sbjct 14451 AGGGTGCGGCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 14510 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| ||||| | || ||| | ||| || || ||||| Sbjct 14511 ATACCCTCCTTGTCTTGAATCTTC-GACTTGACGTTGTCAATGGTATCGGATGATTCCAC 14569 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || ||||| || || || | || || |||||||||||||| Sbjct 14570 CTCGAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 14617 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| |||||||| |||||| |||||||| || || || Sbjct 14619 CCACCACGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAG 14678 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| ||||| || || || || || || | ||||| ||||| || || Sbjct 14679 AGAGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 14738 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || || || ||||| |||||| Sbjct 14739 ATGCCCTCCTTGTCCTGGATC-TTCGACTTCACATTATCGATGGTGTCGGATGACTCCAC 14797 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || || || || || | || || || || |||||||| Sbjct 14798 CTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14845 >seq2808 Length=116519 Score = 91.5 bits (100), Expect = 9e-14 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || |||||| |||||| || ||||| || || ||||| || || |||| || Sbjct 80903 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 80844 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | ||||| |||||||| || | |||||||||||| | Sbjct 80843 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 80784 Query 34618 ATCTT 34622 ||||| Sbjct 80783 ATCTT 80779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314717609392358