Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq2768 93.3 3e-14 >seq2768 Length=91863 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| |||||||| || ||||||||||| || ||||| | || || ||| || Sbjct 14617 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACGATTACGCTCGAGGTGGAATCATCC 14558 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || |||| ||||| || || ||||| || ||| |||| ||| | Sbjct 14557 GATACCATTGACAAC--GTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCCCCGGACC 14500 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || | || ||||| || || || ||||| |||| |||| | |||| || |||| Sbjct 14499 AGCAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACA 14440 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||| || || ||| ||| ||||||||||| | || | ||||| || Sbjct 14439 ACATTCAGAAGGAGTCCACCCTGCATTTGGTTCTCCGCCTTCGTGGTGG 14391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355848842309802