Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2808 185 2e-41 seq2768 170 4e-37 seq2512 147 5e-30 seq2931 93.3 1e-13 >seq2808 Length=116519 Score = 185 bits (204), Expect = 2e-41 Identities = 176/225 (78%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| ||||| ||||| | ||||||||||||||| || |||||||| || |||| ||| Sbjct 80919 TCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAG 80860 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 ||| | || || || ||||||||||| |||||||| ||||| || ||||| || |||| Sbjct 80859 GGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAAT 80800 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| ||||||||||||||||| || || || ||||| ||||| || || ||||| Sbjct 80799 TCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTC 80740 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| ||||| || ||||| || || | ||||| Sbjct 80739 AAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695 >seq2768 Length=91863 Score = 170 bits (188), Expect = 4e-37 Identities = 171/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | ||| ||||| ||||| || || ||||| || || | || || Sbjct 14624 ACGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGT 14683 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| ||||| || ||||| || ||||||||||||| || Sbjct 14684 GCGGCCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCC 14743 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| ||||| || ||||||||||| || || ||||| | Sbjct 14744 CTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAA 14803 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| ||||| |||||||| ||||| || || | |||||| Sbjct 14804 AGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14845 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | |||||||||| ||| || |||||||| || || || || Sbjct 13940 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 13999 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 ||| ||||| || |||||||| || |||||||| | || || ||||| || || | || Sbjct 14000 CCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACC 14059 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||| ||||| ||||| || ||||| || |||||||| || ||||||||||| Sbjct 14060 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAG 14119 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || |||||||| || || ||||| || || | |||||| Sbjct 14120 AGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 14862 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 14921 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || ||||| ||||| || |||| ||| |||||||| Sbjct 14922 TCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 14981 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| |||||||| || ||| || ||||| || ||||| ||| Sbjct 14982 TGGATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 15041 Query 211083 TTTCCCGT 211090 || || || Sbjct 15042 TTGCCAGT 15049 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || | |||||||| || |||||||| ||||| | ||||| | ||||| Sbjct 14178 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCC 14237 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||| || ||||| || ||||| || || | || ||||| || Sbjct 14238 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 14297 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || || || || || || || || || ||| Sbjct 14298 TGGATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTC 14357 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| || || | ||||| Sbjct 14358 TTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389 >seq2512 Length=28997 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | |||||| | |||||| || ||||||||||| |||||||| Sbjct 21225 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATC 21166 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 |||||||| ||||| || |||| ||| ||||||||||||||||| || || || ||| Sbjct 21165 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 21106 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || || || ||| || ||||| || ||||| ||||| ||||| | ||||| || || Sbjct 21105 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21047 >seq2931 Length=79620 Score = 93.3 bits (102), Expect = 1e-13 Identities = 187/276 (68%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||||||||| | ||||| ||||| |||||| ||||| || |||| Sbjct 58747 GTTCTTCTGGTTGCTCTTGCGGTTGCAA---GCATCCTTGTACAGCATGAAAGGGTTTCC 58691 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||| | |||| | |||||||| | |||||||| ||| || || ||||| Sbjct 58690 TGTCTCGGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCTGAGCCTTGATGGTCTTGCG 58631 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | || || || |||||||| | | |||||| ||||||| || || || || || Sbjct 58630 ACCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGAGCCTCGAACTCATCGCCGTAAACGTC 58571 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || || || |||||||| | ||| |||| | |||| | || || || Sbjct 58570 TGCCAATCCAGGGCATTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCAACACG 58511 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | | |||||| || ||||| Sbjct 58510 CTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 58475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159105573788990