Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2768 89.7 3e-13 >seq2768 Length=91863 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || ||||| || ||||| || || |||||||| ||||| || || Sbjct 14161 ATGCAGATTTTCGTCAAGACCCTGACTGGAAAGACCATTACTCTCGAGGTTGAGTCGTCG 14102 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || ||| || || || ||| | || || || || Sbjct 14101 GACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 14042 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || || || || || || || || || | | || | |||| |||||| Sbjct 14041 CAGCGTTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGGAGGACGCTGAGCGACTACAAC 13982 Query 23791 ATACAAAAAGAG 23802 || || || ||| Sbjct 13981 ATCCAGAAGGAG 13970 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || || || || || ||||| || ||||| || || || | Sbjct 14617 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACGATTACGCTCGAGGTGGAATCATCC 14558 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||| | | || || ||| ||||| || ||| | || || || || Sbjct 14557 GATACCATTGACAACGTCAAGTCGAAGATTCAAGACAAGGAGGGTATTCCCCCGGACCAG 14498 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||| ||||| || |||| |||| ||||| | || |||||| Sbjct 14497 CAGCGCCTGATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAAC 14438 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || |||||||| | ||||| ||| Sbjct 14437 ATTCAGAAGGAGTCCACCCTGCATTTGGTT 14408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337996722468008