Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016
-05-27] 3,126 sequences; 31,419,026 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq2808 149 1e-30
seq2768 140 8e-28
seq2512 125 2e-23
seq3126 95.1 3e-14
>seq2808
Length=116519
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| ||||||||||| | ||| |||||||| || || |||| ||||| || | | ||
Sbjct 80916 ACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 80857
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || |||||||| || || || ||||| || ||||| ||
Sbjct 80856 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCC 80797
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| ||||| || | ||||| || |
Sbjct 80796 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAG 80737
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||||| || || | ||| | ||||||
Sbjct 80736 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 80695
>seq2768
Length=91863
Score = 140 bits (154), Expect = 8e-28
Identities = 164/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | ||||| | ||||||||| || || || || | ||||| || | | |||
Sbjct 14624 ACGAAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGAGT 14683
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| || ||||| || || || || ||||| || ||||| ||
Sbjct 14684 GCGGCCGTCCTCAAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCC 14743
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||||||| ||||||||||| || | ||||| || ||
Sbjct 14744 CTCCTTGTCCTGGATCTTCGACTTCACATTATCGATGGTGTCGGATGACTCCACCTCCAA 14803
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||| | || || | ||| | |||||
Sbjct 14804 AGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14845
Score = 127 bits (140), Expect = 5e-24
Identities = 142/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | |||||| || || || || |||| ||||| |||| | || | || ||
Sbjct 14862 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 14921
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || ||||| ||||| || ||||| || |||||||||
Sbjct 14922 TCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 14981
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || |||||||| || |||| || || || | ||||| |||
Sbjct 14982 TGGATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 15041
Query 225682 TTGCCCGTCA 225691
||||| ||||
Sbjct 15042 TTGCCAGTCA 15051
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | || || ||||| || || || | ||||| || | || ||
Sbjct 14396 ACGAAGGCGGAGAACCAAATGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGACAGGGT 14455
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || | |||||| ||||| ||||| || || || ||||| || ||||||||
Sbjct 14456 GCGGCCGTCCTCCAACTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACC 14515
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||||||||| ||||| ||| || || ||||| || || | |||||| || |
Sbjct 14516 CTCCTTGTCTTGAATCTTCGACTTGACGTTGTCAATGGTATCGGATGATTCCACCTCGAG 14575
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||| ||||||||||| || | ||| ||
Sbjct 14576 CGTAATCGTCTTGCCAGTAAGAGTCTT 14602
Score = 107 bits (118), Expect = 5e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| |||||| || || |||| ||||| ||| || ||
Sbjct 13940 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 13999
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|||||||| || |||||||| ||||||||||| | || || ||||| || || |||||
Sbjct 14000 CCTCCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATACC 14059
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || || ||||| ||| || || |||||||| || | || || || |
Sbjct 14060 CTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGACGACTCAACCTCGAG 14119
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || |||| || || | ||| | |||||
Sbjct 14120 AGTAATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 14161
Score = 98.7 bits (108), Expect = 2e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| ||||| || | ||||| || || |||| |||||||| | || || | |||||
Sbjct 14178 AGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAGGGTACGGCCATCC 14237
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || ||||| || || || || ||||| || || || || ||||| |||
Sbjct 14238 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 14297
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || ||||| || || || | || || || | || || |||
Sbjct 14298 TGGATCTTAGACTTGACGTTGTCGATCGTATCCGACGACTCGACTTCCAGGGTAATTGTC 14357
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | || || | ||| | ||||||
Sbjct 14358 TTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 14389
>seq2512
Length=28997
Score = 125 bits (138), Expect = 2e-23
Identities = 135/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | || | ||||| || |||||||| |||||||||||
Sbjct 21225 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCAAGCTGCTTGCCAGCGAAGATC 21166
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| ||||| ||||| || ||||| || |||||||| |||||||| ||| ||| |||
Sbjct 21165 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 21106
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| || || |||| || || || | ||||| |||||||||||||| || || | |||
Sbjct 21105 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 21047
>seq3126
Length=32148
Score = 95.1 bits (104), Expect = 3e-14
Identities = 82/102 (80%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||||||||| || |||||||| | |||||| || | |||||||| || || || |
Sbjct 2469 TTCAGGATGACCGAAGAATCAGAAAAGATGTTGGTATAATATAGGATCACCACCACCAGC 2410
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| |||||||| ||||||||||||||||||||||||||
Sbjct 2409 AGCTTCAAAAAATGATGTATTAAAATTTCTATCAGTTAAAAC 2368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192483436889444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |