Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL308_20[genbank_20GCA_5F001630595.1_202016 -05-27] 3,126 sequences; 31,419,026 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2931 167 3e-36 >seq2931 Length=79620 Score = 167 bits (184), Expect = 3e-36 Identities = 412/624 (66%), Gaps = 2/624 (0%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || || ||||| || |||| || |||||||||||||||| || ||| Sbjct 58603 GTAGAGAGCC--TCGAACTCATCGCCGTAAACGTCTGCCAATCCAGGGCATTCGTTGGGG 58546 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||| | | |||||| || | | || ||| || ||||| |||||||| || ||||| Sbjct 58545 CACATGAGGGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAG 58486 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 ||||| || | || |||| | ||| || ||||| |||||| | | || Sbjct 58485 AGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTTCCGTGGTTCTTTCTCAAGTCC 58426 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 || ||||| | | ||| | |||||||| || | || || || | | | ||||| || Sbjct 58425 AGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGC 58366 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || || || || | || || || ||||| || | || | | ||| |||| Sbjct 58365 TTGTTGCCACCTTGGTCAACGTACCTCGCAGTGTTGTTGAAGACGCGGAGCATGGGAACG 58306 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 |||||||| || |||| || || || | ||| || ||| | || || ||| | Sbjct 58305 ATACCGTTGGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGG 58246 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 ||| | || || ||||| || |||| || || | || || || | ||| ||| Sbjct 58245 ATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCG 58186 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 ||||||||||| ||||| || ||| |||||| | | || ||| || | || Sbjct 58185 TAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGAGAGCTGGGCC 58126 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452 || || || ||||| || | ||| || || || || || || |||| ||| | Sbjct 58125 TGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATG 58066 Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGC 78512 || |||||||| || || | || || ||| ||||| || ||||| |||||| Sbjct 58065 AGGTTGTATGTCTCGATTGTCTTCTCGATATCCTCGCCGTGAATGCCCACCGCAACACGC 58006 Query 78513 ATCAACATATGCTGAGGTCTTTCA 78536 || | ||| ||||| || || ||| Sbjct 58005 ATAATCATGTGCTGTGGCCTCTCA 57982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694641655816640