Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016
-04-25] 2,106 sequences; 25,864,194 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1789 118 2e-21
seq1814 107 4e-18
>seq1789
Length=64549
Score = 118 bits (130), Expect = 2e-21
Identities = 255/376 (68%), Gaps = 8/376 (2%)
Strand=Plus/Plus
Query 230266 ATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAG 230325
||| ||||||| | || |||||| ||||| ||| |||||||||||||| |
Sbjct 52267 ATGGCTGGCCTTACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACTGAC 52326
Query 230326 TTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGG---TCAAA 230382
|||| | ||| | | || | ||| || || || ||| | ||| || || ||
Sbjct 52327 TTCGCCTGCCTTCTCTTCTCCCACCTCAAGCACC-GC--CCAAGCAAGAAGGCCGTCCAA 52383
Query 230383 CAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGT 230442
| ||||||| || || || | ||| |||||||| | ||| || |||| |||
Sbjct 52384 GACGTCATTACCGAGGCTGTCACCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGT 52443
Query 230443 CGCCTTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCG 230501
||| | ||||||||||| ||||| ||| || ||||| || ||||| |||||| |
Sbjct 52444 GCCCTGCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAG 52502
Query 230502 CATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTAT 230561
|| | || | || || ||||||| ||||| || | ||||| || | || ||
Sbjct 52503 ACTTCTGCTTTCCCTCGGAAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCAT 52562
Query 230562 GGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCA 230621
|||| ||| || || ||| ||||||||||||||||| ||||| ||| ||||| ||
Sbjct 52563 GGAGAACATCTCCCTGGCAGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCA 52622
Query 230622 GAGGCCTGGTGTGATG 230637
| | ||||||| |||
Sbjct 52623 AAAGACTGGTGTCATG 52638
>seq1814
Length=47612
Score = 107 bits (118), Expect = 4e-18
Identities = 203/299 (68%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428
|||| |||||||||| | ||||| || ||| ||||| |||| || || ||||||
Sbjct 5873 AGGGTGTAGTAACTCTTAGCCTCGGGCTTCTGCTTGACGAATTCGGCCAAGTTACCCTTG 5814
Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488
|| |||||| ||| ||||| ||| ||| ||||| || ||||||||
Sbjct 5813 TAGCAGGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCAGTGCAGACTTCGTCGAGG 5754
Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548
|| ||||||||||| || ||||||| | | | || | || | | ||||| ||
Sbjct 5753 AAGCCGGAGTCGTGAGAAACAATCAGCGAGGTGATCTCAGTGTGGGTCTTGAGGTACTCC 5694
Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608
| |||| | ||||| | ||| | || || || || ||||||||||| || |
Sbjct 5693 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTAGTAGGTTCGTCAAGAAGAAGAACA 5634
Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
| || |||| ||||| || | ||||||||||| ||||| ||||| || ||||| ||
Sbjct 5633 TCGGCCTTCATCAGCATAGCCCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 5575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057795456602780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |