Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1789 118 2e-21 seq1814 107 4e-18 >seq1789 Length=64549 Score = 118 bits (130), Expect = 2e-21 Identities = 255/376 (68%), Gaps = 8/376 (2%) Strand=Plus/Plus Query 230266 ATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAG 230325 ||| ||||||| | || |||||| ||||| ||| |||||||||||||| | Sbjct 52267 ATGGCTGGCCTTACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACTGAC 52326 Query 230326 TTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAGACGG---TCAAA 230382 |||| | ||| | | || | ||| || || || ||| | ||| || || || Sbjct 52327 TTCGCCTGCCTTCTCTTCTCCCACCTCAAGCACC-GC--CCAAGCAAGAAGGCCGTCCAA 52383 Query 230383 CAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGT 230442 | ||||||| || || || | ||| |||||||| | ||| || |||| ||| Sbjct 52384 GACGTCATTACCGAGGCTGTCACCATCGAGCAGGAGTTCTTGACTGAGGCACTTCCCTGT 52443 Query 230443 CGCCTTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCG 230501 ||| | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | Sbjct 52444 GCCCTGCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAG 52502 Query 230502 CATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTAT 230561 || | || | || || ||||||| ||||| || | ||||| || | || || Sbjct 52503 ACTTCTGCTTTCCCTCGGAAACGAGAAGTACTACAAGTCGACCAACCCATTCGACTTCAT 52562 Query 230562 GGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCA 230621 |||| ||| || || ||| ||||||||||||||||| ||||| ||| ||||| || Sbjct 52563 GGAGAACATCTCCCTGGCAGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCA 52622 Query 230622 GAGGCCTGGTGTGATG 230637 | | ||||||| ||| Sbjct 52623 AAAGACTGGTGTCATG 52638 >seq1814 Length=47612 Score = 107 bits (118), Expect = 4e-18 Identities = 203/299 (68%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428 |||| |||||||||| | ||||| || ||| ||||| |||| || || |||||| Sbjct 5873 AGGGTGTAGTAACTCTTAGCCTCGGGCTTCTGCTTGACGAATTCGGCCAAGTTACCCTTG 5814 Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488 || |||||| ||| ||||| ||| ||| ||||| || |||||||| Sbjct 5813 TAGCAGGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCAGTGCAGACTTCGTCGAGG 5754 Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548 || ||||||||||| || ||||||| | | | || | || | | ||||| || Sbjct 5753 AAGCCGGAGTCGTGAGAAACAATCAGCGAGGTGATCTCAGTGTGGGTCTTGAGGTACTCC 5694 Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608 | |||| | ||||| | ||| | || || || || ||||||||||| || | Sbjct 5693 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTAGTAGGTTCGTCAAGAAGAAGAACA 5634 Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | || |||| ||||| || | ||||||||||| ||||| ||||| || ||||| || Sbjct 5633 TCGGCCTTCATCAGCATAGCCCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 5575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057795456602780