Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1789 107 2e-18 >seq1789 Length=64549 Score = 107 bits (118), Expect = 2e-18 Identities = 273/412 (66%), Gaps = 10/412 (2%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| || || || | || | ||| || || ||| Sbjct 52313 CCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTAAGGCCAGCCATGAGGCCACGCTTC 52254 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | || || || || || ||||| ||||||||||||| ||||| Sbjct 52253 TTGAGCCAGAAAATGGATGCAAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAG 52194 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCA--TTTCTGCACCCACT 17162 || | | || | |||| | || | || |||| | ||||| | ||| |||| | Sbjct 52193 GCAACGAGGCGCTGGGCGAAGGTAGAATCCTTGTCTTGGATCCACCTGACTG--CCCAGT 52136 Query 17163 CGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA---ATTTCTCTTTTT 17219 |||| || | ||| |||||| || || || ||||| || || | || | || Sbjct 52135 CGGCCTTCTTCTTAATGCAAGGAATAGTCTCAATGGCATTGAAGAGGTATGTGCGTTGAG 52076 Query 17220 CCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCT 17279 ||| | || | || || || |||||||| ||| ||| | |||| ||| ||||||| Sbjct 52075 CCT---GCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGTTCT 52019 Query 17280 CCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGA 17339 | || || || || ||||| ||||| ||||| || | ||||| || || | || Sbjct 52018 CGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATTTGGACCTCACTGCTGA 51959 Query 17340 ATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | ||||| || || ||||| || || ||||| |||||||| || || Sbjct 51958 AGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCGAAGAAAGC 51907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517531975612080