Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1789 336 2e-87 seq1271 129 6e-25 seq1523 123 3e-23 seq1650 105 7e-18 >seq1789 Length=64549 Score = 336 bits (372), Expect = 2e-87 Identities = 566/812 (70%), Gaps = 23/812 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | ||||| Sbjct 51778 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGACCTT 51837 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | || | |||||| | |||||| | |||||| Sbjct 51838 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 51897 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || ||||||||| ||||| || ||||||||||| || |||| || Sbjct 51898 CACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAACGC 51957 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| ||||| || | | ||||| || ||||||||||| || || ||| || Sbjct 51958 TTCAG-CAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGAT 52016 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 |||||| | ||| | || | || || |||||||||||| ||| | ||| Sbjct 52017 CGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAA------GGA 52070 Query 116932 GGAGAAGCTC------CGTT--TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG 116983 | || |||| | | | || || ||||| ||||| || || ||| | || || Sbjct 52071 GCAG--GCTCAACGCACATACCTCTTCAATGCCATTGAGACTATTCCTTGCATTAAGAAG 52128 Query 116984 AAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTG 117043 |||||||| ||||| | | |||||| | || || | |||||| | ||||||| Sbjct 52129 AAGGCCGACTGGGCAGTCAGGTGGATCCAAGACAAGGATTCTACCTTCGCCCAGCGCCTC 52188 Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 || ||||| || ||||||||||| ||||||| || ||| || || |||| || ||| Sbjct 52189 GTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTGCATCCATTTTCTGG 52248 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 |||||||| || ||||||||| | ||||| || ||| |||||||||||||| | ||| Sbjct 52249 CTCAAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCGAACGAGCTCATCTCTCGTGAC 52308 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 |||||||| || ||||| ||||| | || ||| || | ||| || || ||| Sbjct 52309 GAGGGTCTCCACACTGACTTCGCCTGCCTTCTCTTCTCCCACCTCAAGCACCGCCCAAGC 52368 Query 117224 GCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACC 117283 | | |||| || || | ||||| || ||| ||||||||||| ||| | || Sbjct 52369 AAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCACCATCGAGCAGGAGTTCTTGACT 52428 Query 117284 GAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGA 117342 || || | | || |||| ||||| || | || | | |||| ||||||||| || Sbjct 52429 GAGGCACTTCCCTGTGC-CCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 52487 Query 117343 GTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAA 117402 ||||||||||||||| || ||||| || | || ||| ||||||| || |||| Sbjct 52488 GTTCGTCGCCGACAGACTTCTGCTTTCCCTCGGAAACGAGAAGTACTACAAGTCGACCAA 52547 Query 117403 CCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||| | ||||| ||| | ||||||| ||| Sbjct 52548 CCCATTCGACTTCATGGAGAACATCTCCCTGG 52579 >seq1271 Length=16661 Score = 129 bits (142), Expect = 6e-25 Identities = 138/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772 || ||||| ||||||||| |||| || || || |||| | | | | |||| ||||| Sbjct 14616 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGATACCATCGACAACG-TCAAGAG 14674 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 || || | ||||| ||||| |||||| ||||||||||||| || |||| ||| || || Sbjct 14675 CAAGATCCAAGACAAGGAGGGAATCCCCCCGGACCAGCAACGTCTGATCTTCGCCGGAAA 14734 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 || || || |||| ||||||||| ||||||||| |||||||||||| |||| || || Sbjct 14735 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAATATCCAGAAGGAGTCCACCCTCCA 14794 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| | || Sbjct 14820 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 14879 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | ||| || || | ||||| ||||| || ||| |||||||| Sbjct 14880 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 14939 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || || || ||||| || || | ||||| ||| |||||||||| Sbjct 14940 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 14999 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || ||||||||| |||| || || Sbjct 15000 ATTCAGAAGGAGTCCACCCTCCA 15022 Score = 105 bits (116), Expect = 7e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || || | || ||||| | | Sbjct 15048 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTGGAGGTCGAGTCATCT 15107 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| ||||||| ||||| |||||||| ||| ||||||| Sbjct 15108 GATACCATTGACAACG-TCAAGTCCAAAATTCAAGACAAGGAGGGCATTCCCCCGGACCA 15166 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| || || || ||| |||| || | || ||||| |||||||| Sbjct 15167 GCAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCCTGTCGGACTACAA 15226 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||| ||||||||| | || |||||| Sbjct 15227 CATTCAGAAGGAGTCGACCCTGCAT 15251 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || || || || | || ||||| | | Sbjct 15276 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACGATTACGCTGGAAGTCGAGTCGTCG 15335 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| ||||| || || | || || ||||| |||||| ||||||| Sbjct 15336 GATACGATCGATAACG-TCAAGTCGAAGATCCAAGATAAGGAGGGTATCCCCCCGGACCA 15394 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||| ||||| || || | || || || || ||||| Sbjct 15395 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACTCTGTCTGATTACAA 15454 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| ||||| || Sbjct 15455 CATCCAGAAGGAGTCTACGCTACATCTTGT 15484 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || || ||||| || |||| || || | | Sbjct 15504 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCT 15563 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || ||||| ||||| ||||||| Sbjct 15564 GACACCATTGACAACG-TCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 15622 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | || || || |||||||| || | | || || | ||||||||| Sbjct 15623 GCAGCGCCTGATATTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAA 15682 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| ||| || || Sbjct 15683 CATCCAGAAGGAGAGCACTCTTCA 15706 >seq1523 Length=98661 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || |||||||| || |||||| | || || || | || Sbjct 96210 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 96269 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || || | ||||| ||||| || ||| |||||||| Sbjct 96270 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 96329 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || || | || ||||| ||||||||| Sbjct 96330 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAAC 96389 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 96390 ATCCAGAAGGAGTCCACTCTTCA 96412 >seq1650 Length=88388 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | |||||||| ||||||||| | || || || | |||||| | Sbjct 73015 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACTATC 72956 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| || ||| ||||||||||||| || Sbjct 72955 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 72896 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||||| || || | ||||| || ||||||||||||||||||| Sbjct 72895 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 72836 Query 40879 G 40879 | Sbjct 72835 G 72835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515205636854560