Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1367 288 9e-73 seq1789 226 3e-54 seq1523 107 2e-18 seq1271 98.7 9e-16 >seq1367 Length=27082 Score = 288 bits (318), Expect = 9e-73 Identities = 575/848 (68%), Gaps = 3/848 (0%) Strand=Plus/Minus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| || || ||||| ||||| || || | |||||| ||||| || || || || | Sbjct 8532 CAAG-TTACACACGGCAACCTCATCAGGGGCAGAGTACTCGACAATCTCAGTGCACAGGT 8474 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 || | || || || | || |||||||||| || || ||||| | |||||||| Sbjct 8473 TGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGT 8414 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | | |||| | || | || |||||| ||| ||||||| || | ||| | ||| Sbjct 8413 ACAACATGAAGGGGTTTCCTGTCTCGGTCTGAGACTCGAGAATGGAGTACCAAAGCTTCT 8354 Query 23211 GAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269 | || | | ||| ||| ||| || || | |||||| | | ||| | ||| || Sbjct 8353 GGGCCTTGATG-GTCTTGCGTCCCTTACCCTCCTTCTCGTAGCTCTCGTAGAGCGCCTCG 8295 Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329 || || | || ||| ||| |||| || || ||| | || |||||||| |||| Sbjct 8294 AACTCATCGCCATAAACGTCCGCCAACCCAGGGCATTCGTTGGGGCACATGAGGGTCCAG 8235 Query 23330 ATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGT 23389 || || || || || |||| || |||||||| ||||| ||||||||||||| Sbjct 8234 TCACCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAG 8175 Query 23390 TCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACG 23449 || |||||||| || ||||| || ||| ||||||| ||| |||| || || ||||| Sbjct 8174 TCACGGGCGCGGACTTCCTCCTTTCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAACACA 8115 Query 23450 TCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGA 23509 ||||| ||||| ||||| | ||| | ||| || ||||| || | ||| ||||| ||||| Sbjct 8114 TCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACCCTGG 8055 Query 23510 TCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCG 23569 || ||||| | || ||||||||| | || | ||||| || || | |||||| || Sbjct 8054 TCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATGGGAACAATACCGTTCGAGTTT 7995 Query 23570 CCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATG 23629 ||| || || | | ||| | || || | ||| | || || || || Sbjct 7994 CCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCCGATA 7935 Query 23630 CCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG 23689 |||||| | | || || ||||| || || || |||||||| ||||| ||||| ||| Sbjct 7934 CCTCCGGCAGTCTTTGAGATCATGGCACACGTCTTGAGAGTGTCATAGATACCCTCAATG 7875 Query 23690 CTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCC 23749 || ||||| || | |||||||||| || || |||| || || | || ||| | || Sbjct 7874 CTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTACCAGCA 7815 Query 23750 GAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCG 23809 ||| ||||| ||| ||||| || ||||| ||||| || ||||| || ||| Sbjct 7814 TTGAAGAGTGTGGGGGAAGCGTGTGTGAAGTACTTGGAAGACATGAGGTTGTATGTCTCG 7755 Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869 |||| ||||| ||||| ||||| || || | ||| || ||||| ||||||| || Sbjct 7754 ATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGTGCTGC 7695 Query 23870 GGTCTCTC 23877 || ||||| Sbjct 7694 GGCCTCTC 7687 Score = 100 bits (110), Expect = 3e-16 Identities = 345/534 (65%), Gaps = 13/534 (2%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || ||||| |||||||| ||||| || || | |||||| | ||| || || | Sbjct 9421 TGGTACGGAGATAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGG 9362 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | || | ||||| | |||| ||||| |||||| | Sbjct 9361 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCAA 9302 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | || || || || || || ||||| | | | || ||| || || ||||| |||| Sbjct 9301 TGAAGGCACCACGGTCAGCAGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGG 9242 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 ||||||| || | |||| || || || ||| |||||| ||| || | Sbjct 9241 TCTTGTAGAGGGCCTTGATATCGGCAGGGATGTTGGGGATGTTCTGGATGGAGCCACCGT 9182 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 ||||| ||| || || | || ||| | || ||| || ||| || |||| Sbjct 9181 CCGCGATGATACGATTCTTCATGTTGTCAGACCAAAGGCCCATGTCGACCAAGTCCTTGA 9122 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || |||| || ||||| |||||||| | || ||| ||||| ||| ||||| | Sbjct 9121 GCAACCAGGGGTTGACAACTTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTTCG 9062 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | || ||||| | || ||| || || ||||| | ||| ||||| || |||| Sbjct 9061 AGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCA 9002 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTT---GAG 22617 | || || | || || ||||| | | ||||||| |||| | | ||| ||| Sbjct 9001 TGGGAGCAACGAGGAGAGAGTTGCGGACACCGTGCTGCTTGA---TCTGGGCTTTGAGAG 8945 Query 22618 CATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTG 22671 || |||||||||||| |||| || || || | ||||||| ||||| || Sbjct 8944 AGTC--CCAGTCCCACAGGTCGGTAGGGGTAAC---GCCCCACATGTCGTACTG 8896 >seq1789 Length=64549 Score = 226 bits (250), Expect = 3e-54 Identities = 561/838 (67%), Gaps = 25/838 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || ||||| || ||||||| || || | ||||| Sbjct 51778 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGACCTT 51837 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || |||| | | || || Sbjct 51838 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 51897 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || || || ||||| |||||||| | ||||| | Sbjct 51898 CACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAACGC 51957 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || ||| | | ||||| | ||||| ||||| || ||| | | Sbjct 51958 TT--CAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGA 52015 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | || ||| | || | || | || || || |||||||| || ||| | ||||| | | Sbjct 52016 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGG 52075 Query 57865 A-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | | || || || ||||| || || || || || || || |||||||| Sbjct 52076 CTCAACGCACATAC-CTCTTCAATGCCATTGAGACTATTCCTTGCATTAAGAAGAAGGCC 52134 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| || ||| ||||| || | || || | || |||||| || | || | Sbjct 52135 GACTGGGCAGTCAGGTGGATCCAA---GACAAGGATTCTACCTTCGCCCAGCGCCTCGTT 52191 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || ||||||||||| ||||| ||||| || ||| |||||| | || || ||| | Sbjct 52192 GCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTGCATCCATTTTCTGGCTC 52251 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||| ||| | ||||| || || |||||| | || || || |||||| Sbjct 52252 AAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCGAACGAGCTCATCTCTCGTGACGAG 52311 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAA--ACCGACGC 58158 |||||||| ||||| || || ||||| | | ||| ||| |||| | || | || Sbjct 52312 GGTCTCCACACTGACTTCGCCTGCCTTCTCTTCTCCCAC---CTCAAGCACCGCCCAAGC 52368 Query 58159 GGGATCG-CATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACC 58217 || | | || ||| | || |||||||| ||| | ||||| | ||||| | || Sbjct 52369 AAGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCACCATCGAGCAGGAGTTCTTGACT 52428 Query 58218 GAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 || || || || ||| ||||||| |||||| | |||||| | ||||||||| Sbjct 52429 GAGGCACTTCCCTGTGCCCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAG 52488 Query 58278 TTTGTTGCCGACAGACTTTTGC--TCGAACTGATTGGAGAGCGTCATTACAACACGAAAA 58335 || || |||||||||||| ||| || | || |||| || | ||||| ||| | Sbjct 52489 TTCGTCGCCGACAGACTTCTGCTTTCCCTCGGAAACGAGA-AGT-ACTACAAGTCGACCA 52546 Query 58336 ATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 | || || || || ||| | ||||| || | |||||||| ||||| ||||| || Sbjct 52547 ACCCATTCGACTTCATGGAGAACATCTCCCTGGCAGGCAAGACCAACTTCTTCGAGAA 52604 >seq1523 Length=98661 Score = 107 bits (118), Expect = 2e-18 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || |||| Sbjct 96209 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTC 96268 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 96269 CGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 96328 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || ||||| ||||| ||| | || || || | || || || Sbjct 96329 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAA 96388 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||| || || || || |||||||| |||| || ||||| | || ||| ||||||| Sbjct 96389 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGTGCCAAGAAGCG 96448 >seq1271 Length=16661 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| ||||| || || || || || |||| ||||| | || Sbjct 15504 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCT 15563 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| || || ||| ||||| || | || || |||||| Sbjct 15564 GACACCATTGACAACGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCGGACCAG 15623 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || ||||| ||||| || ||| |||| || | ||| ||||||| || ||| Sbjct 15624 CAGCGCCTGATATTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAAC 15683 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || |||||||| |||| || Sbjct 15684 ATCCAGAAGGAGAGCACTCTTCACTTGGTGCT 15715 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || ||||| | || || || ||||| Sbjct 14820 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 14879 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| || | || || |||||| Sbjct 14880 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 14939 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || ||| | || || | ||| | ||| || ||| Sbjct 14940 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 14999 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || || || || || |||| ||| | || | || |||| Sbjct 15000 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTCTTCGTGGTGGTA 15048 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || ||||| ||||| || | || || || | || Sbjct 15048 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTGGAGGTCGAGTCATCT 15107 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | ||| |||||||| ||| | || || |||||| Sbjct 15108 GATACCATTGACAACGTCAAGTCCAAAATTCAAGACAAGGAGGGCATTCCCCCGGACCAG 15167 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || || ||||| || |||||||| || || || || || ||| Sbjct 15168 CAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCCTGTCGGACTACAAC 15227 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || ||||| || ||| |||| || Sbjct 15228 ATTCAGAAGGAGTCGACCCTGCATTTGGTTCT 15259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445754665199520