Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1367 181 1e-40 seq1789 125 9e-24 >seq1367 Length=27082 Score = 181 bits (200), Expect = 1e-40 Identities = 414/618 (67%), Gaps = 4/618 (1%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 |||||||| || || |||| | |||| | ||| ||||| | || ||||| | | | Sbjct 8297 TCGAACTCATCGCCATAAACGTCCGCCAACCCAGGGCATTCGTTGGGGCACATGAGGGTC 8238 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 63307 || || |||| | || || || ||||| |||||||| || ||||| ||||| || || Sbjct 8237 CAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAAC 8178 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 || || | | | |||||| ||||| |||||| | || || |||||| | | Sbjct 8177 AAG-TCACGGGCGCGGACTTCCTCCTTTCCGTGGTTCTTTCTCAGGTCCAGGAACTCAAA 8119 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| | ||||| || || | ||| ||||| | | | || || || ||||| || || Sbjct 8118 CACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCGCCGGGACGCTTGTTGCCACC 8059 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| || | |||||| || ||||| || | || | | ||| |||| ||||||||| || Sbjct 8058 CTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGAGCATGGGAACAATACCGTTCGA 7999 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACC 63547 | || |||||||||| || || | ||| ||||||| ||| || | || Sbjct 7998 GTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGGTGGATGTTCAATCC 7939 Query 63548 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC-GTGTCATAGATGCCTT 63606 || || || || | || ||||| | || || ||| || | ||||||||||| || | Sbjct 7938 GATACCTCCGGCAGTCTTTGAGATCATGGCACA-CGTCTTGAGAGTGTCATAGATACCCT 7880 Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTC 63666 | |||||||| || |||||| | | || ||| |||| ||| | | || | Sbjct 7879 CAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGGGCCTGTGGTGTAC 7820 Query 63667 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 63726 | ||||| || | || || |||||||| || || | || ||| | || ||||| | Sbjct 7819 CAGCATTGAAGAGTGTGGGGGAAGCGTGTGTGAAGTACTTGGAAGACATGAGGTTGTATG 7760 Query 63727 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63786 |||| || | || |||||| ||||| || || || |||||||| | ||||| Sbjct 7759 TCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGGCAACACGCATAATCATGT 7700 Query 63787 GCTGAGGTCTTTCAACAA 63804 |||| || || ||| ||| Sbjct 7699 GCTGCGGCCTCTCAGCAA 7682 >seq1789 Length=64549 Score = 125 bits (138), Expect = 9e-24 Identities = 365/558 (65%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| || ||| ||||||||||| | | || | ||||| || || || || Sbjct 52334 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTAAGG 52275 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || | ||| ||||||||||| || ||||| || ||||| || || || ||||| |||||| Sbjct 52274 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCAAAGGAGCCGGAGAAGAAG 52215 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758 || || || || || |||||||||| || | || | | | | |||| || Sbjct 52214 ATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAGGTAGAATCCTTGTCTTGG 52155 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 |||||| | ||||| ||||||||||| || | ||||| || || || |||||||| Sbjct 52154 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCAATGGCATTG 52095 Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878 ||||| || | || | || || | || || ||||| | || || | Sbjct 52094 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 52035 Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938 || | |||||||| || || || || || |||||||| || | ||||| | || Sbjct 52034 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 51975 Query 33939 TGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCA 33998 || || || | | || ||||| | || || || || ||||| ||| ||| || Sbjct 51974 TGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 51915 Query 33999 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 34054 || || || | || || || || || | ||||| | || | | || ||||| Sbjct 51914 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 51856 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 || | | || || || | || | || || | ||||| || |||||||| ||||| Sbjct 51855 GTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTT 51796 Query 34115 TTTATACATATTCCAGAT 34132 || ||||| | |||||| Sbjct 51795 CTTGTACATCTGCCAGAT 51778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629801020051680