Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1650 84.2 2e-11 seq1523 84.2 2e-11 >seq1650 Length=88388 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || |||||| ||||||| |||||||| || || || || || || ||| Sbjct 72870 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTG 72929 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||||| | ||||||||||| ||| | Sbjct 72930 TCTTGGATCTTCGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATG 72989 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAA 139755 |||||||| ||||| || || ||||| Sbjct 72990 GTCTTGCCCGTCAAGGTCTTGACGAA 73015 >seq1523 Length=98661 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||||| || ||||| || || ||||| || || | || | || ||| Sbjct 96418 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCATCCTCG 96359 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || || ||||||| || ||||| || || || || || || ||||| | Sbjct 96358 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 96299 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||||| | ||||||||||| ||| | |||||| Sbjct 96298 ATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTG 96239 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 || |||| || || ||||| |||||||| Sbjct 96238 CCCGTCAGGGTCTTCACGAAGATTTGCAT 96210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496050941115200