Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1789 201 2e-46 seq1367 154 2e-32 >seq1789 Length=64549 Score = 201 bits (222), Expect = 2e-46 Identities = 380/558 (68%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| || || ||||| | || ||| | || || Sbjct 51778 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGACCTT 51837 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| |||| ||| | | ||| | | || |||||| | || || || Sbjct 51838 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 51897 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| || | || ||||| |||| ||| || ||||| |||||||| || || | ||| Sbjct 51898 CACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAACGC 51957 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||| ||| | || ||||||| ||||| ||||| |||||||||||||| Sbjct 51958 TTCAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 52017 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||| | || | ||||| || || |||| ||||| || | | Sbjct 52018 GAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAGCAGGCT 52077 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 ||||| | | || ||||| || || || || || | || | || || ||||| Sbjct 52078 CAACGCACATAC---CTCTTCAATGCCATTGAGACTATTCCTTGCATTAAGAAGAAGGCC 52134 Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435 | |||| | |||||||| | ||| | | ||| | | |||| | | || || || Sbjct 52135 GACTGGGCAGTCAGGTGGATCCAAGACAAGGATTCTACCTTCGCCCAGCGCCTCGTTGCC 52194 Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495 || |||||||| ||||| |||||||| || || ||||| |||| || ||||||||| Sbjct 52195 TTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTGCATCCATTTTCTGGCTCAAG 52254 Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555 ||||| || |||||| | || || || | |||||| | || ||||| |||||||| Sbjct 52255 AAGCGTGGCCTCATGGCTGGCCTTACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGGT 52314 Query 125556 CTACACTGTGACTTTGCC 125573 || ||| |||||| ||| Sbjct 52315 CTCCACACTGACTTCGCC 52332 >seq1367 Length=27082 Score = 154 bits (170), Expect = 2e-32 Identities = 316/463 (68%), Gaps = 10/463 (2%) Strand=Plus/Plus Query 96862 CACGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAAC 96921 || |||||||| ||||| ||||| || || || |||||| | ||| ||||| | || | Sbjct 8042 CAAGATACGTTGACCAGGGTGGCAACAAGCGTCCCGGCGCTTTCGCCATCTACGTTGAGC 8101 Query 96922 CTTGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGG 96981 | ||||||||||| || ||||| || | || || | || ||| || || || | Sbjct 8102 CATGGCACGCGGATGTGTTTGAGTTCCTGGACCTGAGAAAGAACCACGGAAAGGAGGAAG 8161 Query 96982 CACGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC- 97040 || ||| | |||||||| || || |||||| | || ||| | ||||||||||| ||| Sbjct 8162 TCCGCGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTCG 8221 Query 97041 --AACGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATT 97098 || |||||| |||||| ||| ||||||||| || | || || || | || Sbjct 8222 AGAAGAACGGTG---ACTGGACCCTCATGTGCCCCAACGAATGCCCTGGGTTGGCGGACG 8278 Query 97099 GCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGG-CCGATACGTG 97157 | ||||| ||||| ||||| ||| | ||||||| | ||||| | ||| Sbjct 8279 TTTATGGCGATGAGTTCGAGGCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGACGCA 8338 Query 97158 AGACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGG 97216 |||| | || | || | |||| || ||| | |||| | | ||||| ||||| || Sbjct 8339 AGACCA-TCAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGTCTCAGACCGAGACAGG 8396 Query 97217 AACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGG 97276 || || | ||| | ||||||||| | || ||||| |||||||| || | || Sbjct 8397 AAACCCCTTCATGTTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGG 8456 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||||| ||||||| |||||||| || ||||| |||||| Sbjct 8457 TACCATCCGCAGCTCCAACCTGTGCACTGAGATTGTCGAGTAC 8499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741039691616560