Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016
-04-25] 2,106 sequences; 25,864,194 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1271 113 1e-19
>seq1271
Length=16661
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || ||||| || ||||| | ||| || || || || ||||||
Sbjct 15016 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCA 14957
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || || || || || || || ||||| ||||| | ||
Sbjct 14956 GCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTC 14897
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || ||||| | || || ||||| ||||| || ||
Sbjct 14896 ACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTC 14837
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 14836 TTGACGAAGATCTGCAT 14820
Score = 96.9 bits (106), Expect = 8e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| ||||| || || ||||| || || || || || || || || || ||||||||
Sbjct 15694 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAT 15635
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | ||| || || || || || || || |||||||||||||| | || || ||
Sbjct 15634 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTGACGTTG 15575
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||| || || || ||||| || ||||| ||||| || || || || || ||
Sbjct 15574 TCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGACG 15515
Query 104549 AATATCTGCAT 104559
|| ||||||||
Sbjct 15514 AAAATCTGCAT 15504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151367331673048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |