Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1271 102 7e-17 >seq1271 Length=16661 Score = 102 bits (112), Expect = 7e-17 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCC 48574 ||| || ||||| ||||||||||| || |||||||| || || | ||| || | ||| Sbjct 15713 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTC-CTGCCATCC 15656 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 |||||||||||||| | | || | |||||||| ||| || | || ||||| ||| Sbjct 15655 TCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCC 15596 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| ||| ||||| | ||||| || | |||||| ||||| || ||||| Sbjct 15595 TGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTC 15536 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || || || || ||||||||||| Sbjct 15535 TTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577 || ||||| || || |||||| ||||||||||| || | || || | |||||| Sbjct 15256 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCC 15197 Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637 | ||||||||| | | || ||||||||||| ||| || | | |||||||| | Sbjct 15196 AACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGA 15137 Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697 ||||| ||||| | |||||||| | ||||| ||| | || || || || Sbjct 15136 ATTTTGGACTTGACGTTGTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTG 15077 Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| || || ||||||||||| Sbjct 15076 CCAGTAAGAGTCTTGACGAAAATCTGCAT 15048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421240387798106