Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1271 98.7 9e-16 >seq1271 Length=16661 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| |||| || || ||||| || | ||| || || || || | ||||||| Sbjct 15256 ACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCC 15197 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || || ||||||| || | ||||| || || ||||| || || ||||| | | Sbjct 15196 AACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGA 15137 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| | ||||||| | | | || |||| ||||| || | ||| || || || Sbjct 15136 ATTTTGGACTTGACGTTGTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTG 15077 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| || || || |||||||| Sbjct 15076 CCAGTAAGAGTCTTGACGAAAATCTGCAT 15048 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || || ||||| || | ||| || ||| | |||| |||||| Sbjct 15028 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCA 14969 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| ||||| ||||||| | | ||||| || || |||||||| || ||||| | Sbjct 14968 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 14909 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||| || | ||| ||||| | ||||| || | |||||||| || Sbjct 14908 ATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTG 14849 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || ||||||||||| Sbjct 14848 CCAGTGAGGGTCTTGACGAAGATCTGCAT 14820 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||| ||||| || | ||| || ||||||| || || |||||| Sbjct 15713 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTC 15654 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||| || || |||| || | | ||||| || || || ||||| || || || | Sbjct 15653 CAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 15594 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||| || | ||||||| | | | ||||||| || || || | || ||||| || Sbjct 15593 AATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTT 15534 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || || || |||||||| Sbjct 15533 TCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448279398734160