Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1367 190 3e-43 seq1789 131 2e-25 >seq1367 Length=27082 Score = 190 bits (210), Expect = 3e-43 Identities = 582/885 (66%), Gaps = 16/885 (2%) Strand=Plus/Minus Query 62883 ATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62940 ||||| || ||||| || |||| ||||| ||||| ||||||| || | | || | Sbjct 8554 ATGTTGGCAGGGCAAGGGACGCCAAGTTACACACGGCAACCTCATCAGGGGCAGAGTACT 8495 Query 62941 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63000 | ||||||||||| || || | ||| || || | || | || || |||| Sbjct 8494 CGACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCT 8435 Query 63001 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63060 | ||| || |||||||| || | ||||| || | || || || ||||||| || | Sbjct 8434 TGCGGTTGCAAGCATCCTTGTACAACATGAAGGGGTTTCCTGTCTCGGTCTGAGACTCGA 8375 Query 63061 TAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCT--TT 63117 ||| | | ||| | | || | ||||| || | ||| || |||| | || || Sbjct 8374 GAATGGAGTACCAAA-GCTTCTGGGCCTTGATGGTC---TTGCGTC-CCTTACCCTCCTT 8320 Query 63118 CGTATAG-TGTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACA 63175 | ||| | | | || |||||||| || || |||| | |||| ||||| || Sbjct 8319 CTCGTAGCTCTCGTAGAGCGCCTCGAACTCATCGCCATAAACGTCCGCCAACCCAGGGCA 8260 Query 63176 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63235 ||| | || ||||| | | ||| || |||| | || || || ||||| |||||||| Sbjct 8259 TTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATC 8200 Query 63236 AGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294 || ||||| ||||| || || || || | || | |||||| ||||| |||| Sbjct 8199 CGGGATCCAGAGAGCGTAGAACAAG-TCACGGGCGCGGACTTCCTCCTTTCCGTGGTTCT 8141 Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354 || | || || |||||| | | | ||| | ||||| || || | ||| ||||| | | Sbjct 8140 TTCTCAGGTCCAGGAACTCAAACACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAG 8081 Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414 | || || || ||||| || ||||| || | |||||| || ||||| || | || | | Sbjct 8080 CGCCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGA 8021 Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCAC 63474 ||| |||| ||||||||| || | || |||||||||| || || ||| |||||| Sbjct 8020 GCATGGGAACAATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC 7961 Query 63475 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63534 | ||| || | || || || || || | || ||||| | || || ||| Sbjct 7960 GGATACGGTGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACA-CGTC 7902 Query 63535 TTAAC-GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63593 || | ||||||||||||||||| |||||||| || |||||| | | || ||| Sbjct 7901 TTGAGAGTGTCATAGATACCCTCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGAC 7842 Query 63594 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 63653 |||| ||| | || || ||||| || | || || |||||||| || || | Sbjct 7841 GACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTGGGGGAAGCGTGTGTGAAGTAC 7782 Query 63654 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCT 63713 || ||| | || ||||| ||||| || | || |||||| ||||| || Sbjct 7781 TTGGAAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCA 7722 Query 63714 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758 || || |||||||| | ||||||||| || || ||| | | |||| Sbjct 7721 ACGGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTG 7677 >seq1789 Length=64549 Score = 131 bits (144), Expect = 2e-25 Identities = 366/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| || ||| ||||||||||| | | || || ||||| || || || || Sbjct 52334 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTAAGG 52275 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || | ||| ||||||||||| || ||||| || ||||| || || || || || |||||| Sbjct 52274 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCAAAGGAGCCGGAGAAGAAG 52215 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 || || || || || |||||||||| || | || | | | | |||| || Sbjct 52214 ATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAGGTAGAATCCTTGTCTTGG 52155 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||||| | ||||| ||||||||||| || | ||||| || || || |||||||| Sbjct 52154 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCAATGGCATTG 52095 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||| || | || | || || | || || ||||| | || || | Sbjct 52094 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 52035 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || | |||||||| || || || || || |||||||| || | ||||| | || Sbjct 52034 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 51975 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || || | | || ||||| | || || || || ||||||||| ||| || Sbjct 51974 TGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 51915 Query 33721 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 33776 || || || | || || || || || | ||||| | || | | || ||||| Sbjct 51914 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 51856 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 || | | || || || | || | || || | ||||| || |||||||| ||||| Sbjct 51855 GTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTT 51796 Query 33837 TTTATACATGTTCCAGAT 33854 || ||||| | |||||| Sbjct 51795 CTTGTACATCTGCCAGAT 51778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622930800914960