Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016
-04-25] 2,106 sequences; 25,864,194 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1367 190 3e-43
seq1789 131 2e-25
>seq1367
Length=27082
Score = 190 bits (210), Expect = 3e-43
Identities = 582/885 (66%), Gaps = 16/885 (2%)
Strand=Plus/Minus
Query 62883 ATGTT--CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 62940
||||| || ||||| || |||| ||||| ||||| ||||||| || | | || |
Sbjct 8554 ATGTTGGCAGGGCAAGGGACGCCAAGTTACACACGGCAACCTCATCAGGGGCAGAGTACT 8495
Query 62941 GTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCT 63000
| ||||||||||| || || | ||| || || | || | || || ||||
Sbjct 8494 CGACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCT 8435
Query 63001 TTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTA 63060
| ||| || |||||||| || | ||||| || | || || || ||||||| || |
Sbjct 8434 TGCGGTTGCAAGCATCCTTGTACAACATGAAGGGGTTTCCTGTCTCGGTCTGAGACTCGA 8375
Query 63061 TAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCT--TT 63117
||| | | ||| | | || | ||||| || | ||| || |||| | || ||
Sbjct 8374 GAATGGAGTACCAAA-GCTTCTGGGCCTTGATGGTC---TTGCGTC-CCTTACCCTCCTT 8320
Query 63118 CGTATAG-TGTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACA 63175
| ||| | | | || |||||||| || || |||| | |||| ||||| ||
Sbjct 8319 CTCGTAGCTCTCGTAGAGCGCCTCGAACTCATCGCCATAAACGTCCGCCAACCCAGGGCA 8260
Query 63176 TTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATC 63235
||| | || ||||| | | ||| || |||| | || || || ||||| ||||||||
Sbjct 8259 TTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATC 8200
Query 63236 AGGAATCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCT 63294
|| ||||| ||||| || || || || | || | |||||| ||||| ||||
Sbjct 8199 CGGGATCCAGAGAGCGTAGAACAAG-TCACGGGCGCGGACTTCCTCCTTTCCGTGGTTCT 8141
Query 63295 TTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA 63354
|| | || || |||||| | | | ||| | ||||| || || | ||| ||||| | |
Sbjct 8140 TTCTCAGGTCCAGGAACTCAAACACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAG 8081
Query 63355 CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCA 63414
| || || || ||||| || ||||| || | |||||| || ||||| || | || | |
Sbjct 8080 CGCCGGGACGCTTGTTGCCACCCTGGTCAACGTATCTTGCAGTGTTGTTGAAGACACGGA 8021
Query 63415 ACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCAC 63474
||| |||| ||||||||| || | || |||||||||| || || ||| ||||||
Sbjct 8020 GCATGGGAACAATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC 7961
Query 63475 GAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTT 63534
| ||| || | || || || || || | || ||||| | || || |||
Sbjct 7960 GGATACGGTGGATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACA-CGTC 7902
Query 63535 TTAAC-GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTA 63593
|| | ||||||||||||||||| |||||||| || |||||| | | || |||
Sbjct 7901 TTGAGAGTGTCATAGATACCCTCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGAC 7842
Query 63594 GACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCAT 63653
|||| ||| | || || ||||| || | || || |||||||| || || |
Sbjct 7841 GACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTGGGGGAAGCGTGTGTGAAGTAC 7782
Query 63654 TTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCT 63713
|| ||| | || ||||| ||||| || | || |||||| ||||| ||
Sbjct 7781 TTGGAAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCA 7722
Query 63714 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758
|| || |||||||| | ||||||||| || || ||| | | ||||
Sbjct 7721 ACGGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTG 7677
>seq1789
Length=64549
Score = 131 bits (144), Expect = 2e-25
Identities = 366/558 (66%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| || ||| ||||||||||| | | || || ||||| || || || ||
Sbjct 52334 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTAAGG 52275
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| | ||| ||||||||||| || ||||| || ||||| || || || || || ||||||
Sbjct 52274 CCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCAAAGGAGCCGGAGAAGAAG 52215
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480
|| || || || || |||||||||| || | || | | | | |||| ||
Sbjct 52214 ATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAGGTAGAATCCTTGTCTTGG 52155
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||||| | ||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 52154 ATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCAATGGCATTG 52095
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
||||| || | || | || || | || || ||||| | || || |
Sbjct 52094 AAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTC 52035
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
|| | |||||||| || || || || || |||||||| || | ||||| | ||
Sbjct 52034 TCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGGGATT 51975
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || | | || ||||| | || || || || ||||||||| ||| ||
Sbjct 51974 TGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGCGGCG 51915
Query 33721 AAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTGTTA-GTTTATTCCA 33776
|| || || | || || || || || | ||||| | || | | || |||||
Sbjct 51914 AAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGACGGTTGTTCCA 51856
Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836
|| | | || || || | || | || || | ||||| || |||||||| |||||
Sbjct 51855 GTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTT 51796
Query 33837 TTTATACATGTTCCAGAT 33854
|| ||||| | ||||||
Sbjct 51795 CTTGTACATCTGCCAGAT 51778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622930800914960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |