Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1789 109 6e-19 >seq1789 Length=64549 Score = 109 bits (120), Expect = 6e-19 Identities = 363/561 (65%), Gaps = 9/561 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || ||||| || || | ||| ||||| || || || | ||| || ||| || | Sbjct 52335 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTAAG 52276 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || | | || || || ||||||||||| || || || ||||| || || || || Sbjct 52275 GCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCAAAGGAGCCGGAGAAGAA 52216 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269 ||||| || ||||| ||||| || || | || | ||| || | |||| || | Sbjct 52215 GATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAA---GGTAGAATCCTTGTC 52159 Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| | | ||||| ||||| || |||||||| ||||| | || || || || Sbjct 52158 TTGGATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCAATGGC 52099 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || ||||| || | || || |||||||| ||||| | || || || Sbjct 52098 ATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTA 52039 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || | || | ||||| || |||||||| |||||||| || | || || | Sbjct 52038 TGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGG 51979 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||| || || || || | || | ||| || || ||||| || || || || || Sbjct 51978 GATTTGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGC 51919 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATC 93564 || || ||||| | | || || || | |||||| || || | | || | Sbjct 51918 GGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTT 51859 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| || || || ||||| || | || || | ||||| || ||||| || || Sbjct 51858 CCAGTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGC 51799 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 51798 CTTCTTGTACATCTGCCAGAT 51778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556846140639440