Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016
-04-25] 2,106 sequences; 25,864,194 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1789 109 6e-19
>seq1789
Length=64549
Score = 109 bits (120), Expect = 6e-19
Identities = 363/561 (65%), Gaps = 9/561 (2%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| || ||||| || || | ||| ||||| || || || | ||| || ||| || |
Sbjct 52335 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTAAG 52276
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| | | || || || ||||||||||| || || || ||||| || || || ||
Sbjct 52275 GCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCAAAGGAGCCGGAGAAGAA 52216
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-C 93269
||||| || ||||| ||||| || || | || | ||| || | |||| || |
Sbjct 52215 GATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAA---GGTAGAATCCTTGTC 52159
Query 93270 T--GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
| |||||| | | ||||| ||||| || |||||||| ||||| | || || || ||
Sbjct 52158 TTGGATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCAATGGC 52099
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| || ||||| || | || || |||||||| ||||| | || || ||
Sbjct 52098 ATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAGGGAGTA 52039
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
| || | || | ||||| || |||||||| |||||||| || | || || |
Sbjct 52038 TGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGCCTCTGG 51979
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
||| || || || || | || | ||| || || ||||| || || || || ||
Sbjct 51978 GATTTGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTCAGAGGC 51919
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATC 93564
|| || ||||| | | || || || | |||||| || || | | || |
Sbjct 51918 GGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACGGTTGTT 51859
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| ||| || || || ||||| || | || || | ||||| || ||||| || ||
Sbjct 51858 CCAGTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGC 51799
Query 93625 TTTTTTGTACATATCCCATAT 93645
|| |||||||| | ||| ||
Sbjct 51798 CTTCTTGTACATCTGCCAGAT 51778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556846140639440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |