Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016
-04-25] 2,106 sequences; 25,864,194 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq1814 87.8 4e-12
>seq1814
Length=47612
Score = 87.8 bits (96), Expect = 4e-12
Identities = 136/189 (72%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
||||||| || ||||| || ||||| || || ||||| |||| |||||||||| ||
Sbjct 6047 TCATTGGTGGAAACGGTGCCGGAAAGTCCACTCTTATCAAGCTCCTTACTGGCGAGA-CC 6105
Query 280234 AGGCCACTGAGGGGTCCGT-TTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCA 280291
| ||| || || |||| ||| |||||| |||||| |||| || | |||| | ||
Sbjct 6106 ATCCCAACGACTGG-CCGTGTTGAGAAGCACCCCAACTTGCGTATTGGTTACATTAAGCA 6164
Query 280292 GCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTG 280351
|||||| | | ||| | |||| || || || | ||| || ||||| ||| | |||||
Sbjct 6165 GCACGCCCTTGAGCACGTTGAGATGCATCTCGAGAAGACCCCCAACCAGTACCTCCAGTG 6224
Query 280352 GCGCTATGC 280360
||| || ||
Sbjct 6225 GCGTTACGC 6233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027809065751146
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |