Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1814 87.8 4e-12 >seq1814 Length=47612 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 ||||||| || ||||| || ||||| || || ||||| |||| |||||||||| || Sbjct 6047 TCATTGGTGGAAACGGTGCCGGAAAGTCCACTCTTATCAAGCTCCTTACTGGCGAGA-CC 6105 Query 280234 AGGCCACTGAGGGGTCCGT-TTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCA 280291 | ||| || || |||| ||| |||||| |||||| |||| || | |||| | || Sbjct 6106 ATCCCAACGACTGG-CCGTGTTGAGAAGCACCCCAACTTGCGTATTGGTTACATTAAGCA 6164 Query 280292 GCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTG 280351 |||||| | | ||| | |||| || || || | ||| || ||||| ||| | ||||| Sbjct 6165 GCACGCCCTTGAGCACGTTGAGATGCATCTCGAGAAGACCCCCAACCAGTACCTCCAGTG 6224 Query 280352 GCGCTATGC 280360 ||| || || Sbjct 6225 GCGTTACGC 6233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027809065751146