Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1271 170 4e-37 seq1650 129 1e-24 seq1814 96.9 6e-15 >seq1271 Length=16661 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || |||||||| || || ||||| || |||||| Sbjct 15046 CCACCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 14987 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 14986 AGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 14927 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| || ||||||||||| | || || || Sbjct 14926 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 14867 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || ||||||||||||||||| |||||||| Sbjct 14866 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 14820 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || ||| ||| || |||||||| || ||| Sbjct 15730 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 15671 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| ||||| || | |||||| || || ||||| || | || ||||| ||||| Sbjct 15670 AGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGG 15611 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| || |||||||| | || || || Sbjct 15610 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACC 15551 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || |||||||||||||| |||||||| Sbjct 15550 TCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | |||||||| ||||| || |||||||| ||||| || Sbjct 15502 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 15443 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || || Sbjct 15442 AGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGG 15383 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||| ||||| | ||||||| ||||| || || | || || ||| Sbjct 15382 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTATCGATCGTATCCGACGACTCGACT 15323 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| ||||| ||||||||||| || ||||| Sbjct 15322 TCCAGCGTAATCGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15276 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | ||||| || || || ||||| || || ||||| || || || Sbjct 15274 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15215 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || || || || | | || ||||| || ||| Sbjct 15214 AGGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 15155 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||||||||| || | ||||||| || ||||| || | ||| || || Sbjct 15154 ATGCCCTCCTTGTCTTGAATTTTGGACTTGACGTTGTCAATGGTATCAGATGACTCGACC 15095 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || || || || || ||||||||||| |||||||| Sbjct 15094 TCCAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15048 Score = 127 bits (140), Expect = 4e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || |||||||| || ||||| || || |||||| Sbjct 14818 CCACCACGCAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAG 14759 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||| ||||| || || Sbjct 14758 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGG 14699 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||||||| |||||||| || | || || || Sbjct 14698 ATTCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGAGGACTCAACC 14639 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || || || Sbjct 14638 TCGAGGGTGATGGTCTTGCCAGT 14616 >seq1650 Length=88388 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| || || || || Sbjct 72837 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 72896 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | ||| ||||| || ||||| || ||||||||||| ||||| | |||||| ||| Sbjct 72897 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 72956 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || || | ||||||||| || ||||| | |||||||||||| Sbjct 72957 ATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 73015 >seq1814 Length=47612 Score = 96.9 bits (106), Expect = 6e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225436 GCACACTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG 225495 ||| ||| |||| |||||||| |||||||| || ||||| | || | | | || | Sbjct 5769 GCAGACTTCGTCGAGGAAGCCGGAGTCGTGAGAAACAATCAGCGAGGTGATCTCAGTGTG 5710 Query 225496 GCCCTTGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTC 225555 | |||||||| | |||||| |||||| || |||| ||| || |||||||| Sbjct 5709 GGTCTTGAGGTACTCCTGGAGCCACTTGACGTTGGCAACATCCAAGTGATTAGTAGGTTC 5650 Query 225556 GTCCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTT 225615 ||| ||||| || | || || | || || || || | | |||| |||||||| || Sbjct 5649 GTCAAGAAGAAGAACATCGGCCTTCATCAGCATAGCCCTGGCAAGAGCGAGCTTCATCTT 5590 Query 225616 CCAGCCCCCGGACAGGGAGCC 225636 ||| || |||||||||||||| Sbjct 5589 CCATCCACCGGACAGGGAGCC 5569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921598138290320