Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1271 86.0 5e-12 >seq1271 Length=16661 Score = 86.0 bits (94), Expect = 5e-12 Identities = 153/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTC-- 33967 || || ||||||| ||||| |||||||||||||| |||||||| || || | ||| Sbjct 15721 AGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCGTCCT 15663 Query 33968 GCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCT 34027 || | || |||| ||||| || |||||||||||||||||||| ||| || | | || Sbjct 15662 GC-CATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATACCCT 15604 Query 34028 CTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCG 34087 | || ||| ||| || ||| | | | | |||| ||| || |||| | Sbjct 15603 CCTTATCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAG 15544 Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 | || || |||||||| || || || || || || ||||| Sbjct 15543 TAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397052208649012