Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1271 122 2e-22 seq1523 109 1e-18 seq1650 95.1 3e-14 >seq1271 Length=16661 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||| | ||| || || ||||| || || || | Sbjct 15502 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 15443 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || ||||| ||||| ||||| || ||| Sbjct 15442 AGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGG 15383 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||| ||||| |||| || ||||| || || | ||| ||| || ||| Sbjct 15382 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTATCGATCGTATCCGACGACTCGACT 15323 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||| ||||| |||||||||||||| || ||||| Sbjct 15322 TCCAGCGTAATCGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15276 Score = 113 bits (124), Expect = 1e-19 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || | |||| ||||| || || ||||| || |||||| Sbjct 15733 TGGCCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 15674 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||||| | || || || | || || || || || ||||| ||||| || | Sbjct 15673 CTCAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGT 15614 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || |||||||| || |||| || ||||| || || | || || || Sbjct 15613 GGGATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCA 15554 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| |||||||| ||||||||||| |||||||| Sbjct 15553 ACCTCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Score = 111 bits (122), Expect = 4e-19 Identities = 128/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || |||||||| ||||||| ||| ||||| ||||| || | ||| ||||| |||||| Sbjct 14782 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAG 14723 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 |||||||| || || |||||||| || || || ||||| || ||| || ||||| Sbjct 14722 ATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGGATCTT-GCTCTTGACGTT 14664 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 || || | |||| || || || ||||| ||||| ||||| || |||| Sbjct 14663 GTCGATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCA 14614 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | || | ||| || || || || || ||||||| | Sbjct 15046 CCACCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 14987 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || ||||| || |||||||| ||||| || || ||| Sbjct 14986 AGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGG---TCCGGG 14930 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| |||| ||||| || || || | ||| ||| || Sbjct 14929 GGAATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCG 14870 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || || || ||||||||||| |||||||| Sbjct 14869 ACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 14820 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| | || || || || || || || || || || || ||| Sbjct 15238 TCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCCAACTGCTTACCAGCAAAG 15179 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||| || || ||| || || || || || || ||||| | || ||| Sbjct 15178 ATCAAACGCTGCTGG---TCCGGGGGAATGCCCTCCTTGTCTTGAATTTTGGACTTGACG 15122 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || || ||||| |||||||| || || ||||||||| Sbjct 15121 TTGTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTGCCAGTAAGAGTCTTG 15062 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 15061 ACGAAAATCTGCAT 15048 >seq1523 Length=98661 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || |||||||| || || | |||| ||| || || ||||| || ||||| | Sbjct 96436 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 96377 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || || || ||||||||||| ||||| || || ||| Sbjct 96376 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 96320 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || |||||||| || | || || || || |||| ||| ||| || Sbjct 96319 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCC 96260 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 96259 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 96210 >seq1650 Length=88388 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || |||||||| || || | || || || || |||||| Sbjct 72837 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 72896 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || || || || ||| ||||| || || || ||||| |||| || || || Sbjct 72897 AGGCGTTGCTGG---TCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTG 72953 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| ||| || || || || ||||| ||||| || |||| ||||||||| Sbjct 72954 TCGATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACG 73013 Query 288463 AA 288464 || Sbjct 73014 AA 73015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179622569237868