Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1814 107 4e-18 >seq1814 Length=47612 Score = 107 bits (118), Expect = 4e-18 Identities = 203/299 (68%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 333693 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 333752 |||| |||||||||| | ||||| || ||| ||||| |||| || || |||||| Sbjct 5873 AGGGTGTAGTAACTCTTAGCCTCGGGCTTCTGCTTGACGAATTCGGCCAAGTTACCCTTG 5814 Query 333753 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 333812 || |||||| ||| ||||| ||| ||| ||||| || |||||||| Sbjct 5813 TAGCAGGCCAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCAGTGCAGACTTCGTCGAGG 5754 Query 333813 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 333872 || ||||||||||| || ||||||| | | | || | || | | ||||| || Sbjct 5753 AAGCCGGAGTCGTGAGAAACAATCAGCGAGGTGATCTCAGTGTGGGTCTTGAGGTACTCC 5694 Query 333873 ATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGC 333932 |||||| | ||||| | ||| | || || || || ||||||||||| || | Sbjct 5693 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTAGTAGGTTCGTCAAGAAGAAGAACA 5634 Query 333933 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 | || |||| ||||| || | ||||||||||| ||||| ||||| || || || || Sbjct 5633 TCGGCCTTCATCAGCATAGCCCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGACAG 5575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102850240851100