Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1271 113 4e-20 seq1523 89.7 5e-13 >seq1271 Length=16661 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || ||||| ||||| ||| Sbjct 15046 CCACCACGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAG 14987 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| |||||||| |||||| |||||||| || || || Sbjct 14986 AGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 14927 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| ||| ||| | | |||| |||||| | |||||| Sbjct 14926 ATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 14867 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || || || |||||||| Sbjct 14866 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 14820 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || ||||| || ||||| ||||| || | Sbjct 15274 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15215 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || | ||| || ||||| ||||||| |||||||| || || || Sbjct 15214 AGGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 15155 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 |||||||||||||| ||||| ||||| ||||| | | ||| || | |||||| Sbjct 15154 ATGCCCTCCTTGTCTTGAATTTTGGACTTGACGTTGT-CAATGGTATCAGATGACTCGAC 15096 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||| ||||| || ||||| || || ||||||||||| Sbjct 15095 CTCCAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15048 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || ||| || || || ||||| |||| | Sbjct 15730 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 15671 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | ||| || ||||| || ||||| | |||| |||||||| || || || Sbjct 15670 AGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGG 15611 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||| ||| || ||| ||||| ||||| | | |||||| | | ||| || Sbjct 15610 ATACCCTCCTTATCCTGAATCTTCGACTTGACGTTGT-CAATGGTGTCAGAAGACTCAAC 15552 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || |||||||| || || || ||||||||||| Sbjct 15551 CTCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 >seq1523 Length=98661 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || || || | || || ||||| || | || ||||| || || || ||||| || Sbjct 96439 GCACCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCC 96380 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || ||| || ||||| || || ||| |||||| |||||||| || || Sbjct 96379 GAAAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGG 96320 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||||| | |||| ||||| | ||| Sbjct 96319 GGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCC 96260 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || || | ||| | || ||||| ||||| || || || || || |||||| || Sbjct 96259 ACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 96206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475488282441440