Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016
-04-25] 2,106 sequences; 25,864,194 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1271 111 1e-19
>seq1271
Length=16661
Score = 111 bits (122), Expect = 1e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
|||||| || || ||||| || || || || || | ||| ||| ||||| ||
Sbjct 15251 ATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCCAACTG 15192
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| || || | ||||| || ||||||||||| |||||||| || || |||||||||||
Sbjct 15191 CTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATTTT 15132
Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315
|||| || | || | ||| || || |||||||| || || |||| ||| ||||| |
Sbjct 15131 GGACTTGA-CGTTGTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTGCCAG 15073
Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| || || ||||| |||||
Sbjct 15072 TAAGAGTCTTGACGAAAATCTGCAT 15048
Score = 105 bits (116), Expect = 6e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| |||| || || || || ||
Sbjct 15694 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAT 15635
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|||| || ||||||||||| || || || || ||||| ||||| || |||| || |
Sbjct 15634 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTGA-CGTT 15576
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| |||||||| || |||||||||| || || ||||| || || || ||
Sbjct 15575 GTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGAC 15516
Query 45329 AAAAATTTGCAT 45340
||||| |||||
Sbjct 15515 GAAAATCTGCAT 15504
Score = 102 bits (112), Expect = 7e-17
Identities = 165/233 (71%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| ||||| || ||||| ||||| || |||||
Sbjct 15505 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCA 15446
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | ||| || | || || || ||| | |||| || ||||||||||
Sbjct 15445 --GACAGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCG 15388
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| || || || || |||||||| || || |||| || | || | || || || |||
Sbjct 15387 GGGGGATACCCTCCTTATCTTGGATCTTCGACTTGA-CGTTATCGATCGTATCCGACGAC 15329
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || |||| ||| || ||||| ||||| || || || ||||||||
Sbjct 15328 TCGACTTCCAGCGTAATCGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451991301015760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |