Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1271 111 1e-19 >seq1271 Length=16661 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 |||||| || || ||||| || || || || || | ||| ||| ||||| || Sbjct 15251 ATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCCAACTG 15192 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 || || || | ||||| || ||||||||||| |||||||| || || ||||||||||| Sbjct 15191 CTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATTTT 15132 Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 |||| || | || | ||| || || |||||||| || || |||| ||| ||||| | Sbjct 15131 GGACTTGA-CGTTGTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTGCCAG 15073 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || || ||||| ||||| Sbjct 15072 TAAGAGTCTTGACGAAAATCTGCAT 15048 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209 ||||| ||||| || || ||||| | || | ||| |||| || || || || || Sbjct 15694 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAAT 15635 Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| || ||||||||||| || || || || ||||| ||||| || |||| || | Sbjct 15634 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTCGACTTGA-CGTT 15576 Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328 || | |||||| |||||||| || |||||||||| || || ||||| || || || || Sbjct 15575 GTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGAC 15516 Query 45329 AAAAATTTGCAT 45340 ||||| ||||| Sbjct 15515 GAAAATCTGCAT 15504 Score = 102 bits (112), Expect = 7e-17 Identities = 165/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| ||||| || ||||| ||||| || ||||| Sbjct 15505 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCA 15446 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | | ||| || | || || || ||| | |||| || |||||||||| Sbjct 15445 --GACAGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCG 15388 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287 | || || || || |||||||| || || |||| || | || | || || || ||| Sbjct 15387 GGGGGATACCCTCCTTATCTTGGATCTTCGACTTGA-CGTTATCGATCGTATCCGACGAC 15329 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || |||| ||| || ||||| ||||| || || || |||||||| Sbjct 15328 TCGACTTCCAGCGTAATCGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451991301015760