Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1523 141 2e-28 seq1271 132 1e-25 seq1650 84.2 5e-11 >seq1523 Length=98661 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || ||||||||||| | ||| ||||| |||||||| |||| ||||||||| | | || Sbjct 96430 CGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTA 96371 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 96370 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCC 96311 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | Sbjct 96310 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGG 96251 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || ||||| || ||||| Sbjct 96250 GTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTG 96213 >seq1271 Length=16661 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | |||||| || |||||||| || | ||||||||| | | ||| Sbjct 15040 CGAAGACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 14981 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || ||||||||||| || ||||| || |||||||||||||| ||| || Sbjct 14980 CGACCATCCTCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCC 14921 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| |||||| |||| |||||| | | || || ||||| Sbjct 14920 TCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAA 14861 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || || || Sbjct 14860 GTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 14823 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || |||||||| |||| |||||| |||| || ||| | ||||| Sbjct 15487 AGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGTACGGCCATCC 15428 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| || || |||||||||||||| || || || || Sbjct 15427 TCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCT 15368 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| || || | | || || |||| ||| |||||| Sbjct 15367 TGGATCTTCGACTTGACGTTATCGATCGTATCCGACGACTCGACTTCCAGCGTAATCGTC 15308 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || || ||||| Sbjct 15307 TTTCCGGTGAGAGTCTTGACGAAGATTTG 15279 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || || ||||||||||| || | ||||||||| | || || Sbjct 15268 CGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTA 15209 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| |||| |||||| || || ||||| | ||||||||||||||| ||| || Sbjct 15208 CGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCC 15149 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||| || ||| ||| || | ||| || | || || || |||| | Sbjct 15148 TCCTTGTCTTGAATTTTGGACTTGACGTTGTCAATGGTATCAGATGACTCGACCTCCAGC 15089 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || ||||| || || ||||| || Sbjct 15088 GTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTG 15051 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| |||||| |||| ||||||||| || ||| Sbjct 15724 CGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTC 15665 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || ||||| ||||||||||| || || || || || |||||||||||||| || || Sbjct 15664 CTGCCATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATACCC 15605 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| || | |||||| | | || || || | Sbjct 15604 TCCTTATCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGA 15545 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || ||||| || Sbjct 15544 GTAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTG 15507 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | |||||| || |||||||| |||| |||||||| | | || | || || Sbjct 14803 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCGTCC 14744 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||||||||||||||| ||||| ||||||||||| ||||| || || Sbjct 14743 TCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCT 14684 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 14683 TGGATCTTGCTCTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTC 14624 Query 199598 TTACCCGT 199605 || || || Sbjct 14623 TTGCCAGT 14616 >seq1650 Length=88388 Score = 84.2 bits (92), Expect = 5e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | ||| | |||||| || |||||||| || || |||| Sbjct 72835 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 72894 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | || || ||||||||||| |||||| || || || ||||| ||| || | Sbjct 72895 TCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 72954 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| ||||| | | || || || | ||||| ||||| ||||| Sbjct 72955 CGATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGT 73000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178889789011102