Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1789 244 1e-59 seq1523 118 1e-21 seq1271 114 1e-20 seq1650 93.3 4e-14 >seq1789 Length=64549 Score = 244 bits (270), Expect = 1e-59 Identities = 577/863 (67%), Gaps = 25/863 (3%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| ||||| || ||| | || ||||| || || || || || || | Sbjct 52638 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCTGC 52579 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707 || ||| ||| | ||| || || || ||||||| | ||||||| ||| | | || Sbjct 52578 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTTCC 52519 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767 || || | || || |||||||| |||||||| ||||||||| ||| | | Sbjct 52518 GA---GGGAAAGCAGAAGTCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 52462 Query 132768 ATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826 || | || ||||| |||| || | | || || || | || |||||||||| || Sbjct 52461 GTTCATGCCGAGCAGG-GCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGA 52403 Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || ||||| | || || ||| | | ||| || || ||| | || || Sbjct 52402 CAGCCTCGGTAATGACGTCTTGGACGGCCTTCTTGCTTGGGCGGTGCTTGAGGTGGGAGA 52343 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | | ||| || ||||| || | |||||||| | || ||||| ||||| || Sbjct 52342 AGAGAAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGA 52283 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | || | ||| | ||||||||| || || |||||||| || |||| || || ||| | Sbjct 52282 AGGTAAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCAAAGGAGCCGG 52223 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| ||||||||||| || || || || ||||||| | |||| || | || | Sbjct 52222 AGAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAGGTAGAATCCT 52163 Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || || | |||||| | | ||||| |||||||| | || | ||| || || || || Sbjct 52162 TGTCTTG-GATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCA 52104 Query 133126 ATGGCGTTCAACA---AACGGAGTT---TCTCTTCCGAGGAACGCACGTAGGTGTCGATG 133179 ||||| || || | | | ||| || ||| | | ||| ||||||||| Sbjct 52103 ATGGCATTGAAGAGGTATGTGCGTTGAGCCTGCTCCTTG------ATGTATGTGTCGATG 52050 Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239 ||| || || | || | ||| | |||||| || |||||| || ||||| ||||| Sbjct 52049 AGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAG 51990 Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299 || ||||| | || || || ||| || |||| || || |||||||| || Sbjct 51989 CGGGCCTCTGGGATTTGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATT 51930 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 ||||| ||||||||| || || || ||||| |||||| | |||||| | |||||| Sbjct 51929 CCGTCAGAGGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTG 51870 Query 133360 AAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416 | || | ||||||| | ||||||||| ||||| | |||||| ||||||| || Sbjct 51869 AGACGGTTGTTCCAGTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGGTCCAGAAA 51810 Query 133417 GACGCCTCGGCTTTTTTGTACAT 133439 || |||||||| || |||||||| Sbjct 51809 GATGCCTCGGCCTTCTTGTACAT 51787 >seq1523 Length=98661 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || |||||||| || |||||| | || || ||| | || Sbjct 96210 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCGTCC 96269 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| |||||||||||| | ||||| Sbjct 96270 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 96329 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | || ||||| ||||||||| Sbjct 96330 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGTACCCTTTCGGACTACAAC 96389 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 ||||| ||||| | || || || ||||| ||| Sbjct 96390 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTG 96422 >seq1271 Length=16661 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| | || |||||| | || Sbjct 14820 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTCGAGTCGTCC 14879 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| |||||| | ||||| Sbjct 14880 GACACCATCGACAATGTGAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 14939 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || || || ||||| || || | ||||| ||| |||||||||| Sbjct 14940 CAGCGCCTGATCTTTGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 14999 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||| | || || || ||||| || ||| Sbjct 15000 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGT 15035 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || || || | || |||||| | | Sbjct 15048 ATGCAGATTTTCGTCAAGACTCTTACTGGCAAGACGATTACGCTGGAGGTCGAGTCATCT 15107 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || ||||| | ||||| ||||| |||||| | ||||| Sbjct 15108 GATACCATTGACAACG-TCAAGTCCAAAATTCAAGACAAGGAGGGCATTCCCCCGGACCA 15166 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | || || || ||| |||| || | || ||||| |||||||| Sbjct 15167 GCAGCGTTTGATCTTTGCTGGTAAGCAGTTGGAGGATGGCCGTACCCTGTCGGACTACAA 15226 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| |||| ||||||||||| || ||| Sbjct 15227 CATTCAGAAGGAGTCGACCCTGCATTTGGTTCTCCGT 15263 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || || || || | || |||||| | | Sbjct 15276 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACGATTACGCTGGAAGTCGAGTCGTCG 15335 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || || |||| || || ||||| || ||| | ||||| Sbjct 15336 GATACGATCGATAACG-TCAAGTCGAAGATCCAAGATAAGGAGGGTATCCCCCCGGACCA 15394 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||| ||||| || || | || || || || ||||| Sbjct 15395 GCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACTCTGTCTGATTACAA 15454 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | ||||| ||| | || || || Sbjct 15455 CATCCAGAAGGAGTCTACGCTACATCTTGTTCTCCG 15490 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||| || |||| || ||| | | Sbjct 15504 ATGCAGATTTTCGTCAAGACCCTGACCGGAAAGACCATTACTCTCGAGGTTGAGTCTTCT 15563 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | || || ||||| || || | ||||| Sbjct 15564 GACACCATTGACAACG-TCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCACCGGACCA 15622 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || |||||||| || | | || || | ||||||||| Sbjct 15623 GCAGCGCCTGATATTTGCTGGTAAGCAGCTGGAGGATGGCAGGACGCTGAGCGACTACAA 15682 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || || || |||||||| ||| | | || |||| Sbjct 15683 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTGCTCCGTCTTCGTGGTGGCC 15732 >seq1650 Length=88388 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || | |||||||| ||||||||| | || || ||| | |||||| | Sbjct 73015 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACTATC 72956 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| |||||||||||| | ||||| || || || Sbjct 72955 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGCCTG 72896 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||||| || || | ||||| || ||||||||||||||| ||| Sbjct 72895 ATCTTTGCTGGCAAGCAGCTTGAGGATGGACGCACTCTTTCCGACTACAACATCCAGAAG 72836 Query 38433 G 38433 | Sbjct 72835 G 72835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500159632951040