Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1523 152 1e-31 seq1271 140 7e-28 seq1367 86.0 1e-11 >seq1523 Length=98661 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||||| || | ||||||||||||||| || || || ||||| || | ||| || | Sbjct 96428 GAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACG 96369 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| ||||||||||| || |||||||| || || || ||||| || ||||| || || Sbjct 96368 GCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 96309 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || |||||| || || || ||||| || ||||| |||||||| Sbjct 96308 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 96249 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | |||||| Sbjct 96248 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 96210 >seq1271 Length=16661 Score = 140 bits (154), Expect = 7e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || || ||||| || || || |||||||| | ||||| | ||||| || Sbjct 15485 AACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGTACGGCCATCCTC 15426 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| || || || || ||||| || || || || || || ||||| Sbjct 15425 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCTTG 15366 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || || || ||||| || ||||| || |||| |||||| Sbjct 15365 GATCTTCGACTTGACGTTATCGATCGTATCCGACGACTCGACTTCCAGCGTAATCGTCTT 15306 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||| || ||||| | |||||| Sbjct 15305 TCCGGTGAGAGTCTTGACGAAGATTTGCAT 15276 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || ||||| ||||| || | || || | ||||| || | |||| Sbjct 15250 TGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCCAACTGC 15191 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| || ||||| | || || ||||| || |||||||| || |||||||||||||| Sbjct 15190 TTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATTTTG 15131 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| |||||||| || || || || || || |||| |||||| || || Sbjct 15130 GACTTGACGTTGTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTGCCAGTA 15071 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | ||||| Sbjct 15070 AGAGTCTTGACGAAAATCTGCAT 15048 Score = 129 bits (142), Expect = 1e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||||||| ||| || || || ||||| ||| || || || ||||| || ||||| Sbjct 15707 GTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCCTCCAGCTG 15648 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| || || || || || || ||||| || || || || || || || ||||| || Sbjct 15647 CTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTT 15588 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| ||||||||||| ||| || || || || |||| |||||||| || Sbjct 15587 CGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTCTTTCCGGT 15528 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 15527 CAGGGTCTTGACGAAAATCTGCAT 15504 >seq1367 Length=27082 Score = 86.0 bits (94), Expect = 1e-11 Identities = 185/274 (68%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 |||||||| |||||| | ||||| ||||||||| | || | | || || || ||| Sbjct 8179 TTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTCGAGAAGAACGGTGACTGG 8238 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 | ||| | || ||||| ||| ||||| | | || |||||||| ||||||||| Sbjct 8239 ACCCTCATGTGCCCCAACGAATGCCCTGGGTTGGCGGACGTTTATGGCGATGAGTTCGAG 8298 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGG-AAGAGCCAAAAAGGTCGTGAAGGCCCAAGA 160767 | || || || || ||||| || ||||| ||| | | || | | | |||||||| | Sbjct 8299 GCGCTCTACGAGAGCTACGAGAAGGAGGGTAAGGGACGCAA-GACCATCAAGGCCCAGAA 8357 Query 160768 ACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAA 160827 || ||| | ||| || | | || |||| || | ||||| || ||||| Sbjct 8358 GCTTTGGTACTCCATTCTCGAGTCTCAGACCGAGACAGGAAACCCCTTCATGTTGTACAA 8417 Query 160828 GGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861 |||||| | |||||||| |||||||||||| Sbjct 8418 GGATGCTTGCAACCGCAAGAGCAACCAGAAGAAC 8451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109451662719302