Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1523 105 4e-18 seq1271 96.9 2e-15 seq1650 82.4 5e-11 >seq1523 Length=98661 Score = 105 bits (116), Expect = 4e-18 Identities = 156/219 (71%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 |||| |||||||||| ||| || ||||| ||||| |||||||||||| | || || Sbjct 96424 CTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCA 96365 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || ||||| || ||||| || || || || |||||||| | || | ||||||||| Sbjct 96364 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 96305 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGT 34942 || ||||| ||||| || | ||||| || | ||| || || | ||| Sbjct 96304 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 96249 Query 34943 TATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| || |||||||| ||||| ||||| Sbjct 96248 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 96210 >seq1271 Length=16661 Score = 96.9 bits (106), Expect = 2e-15 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| || ||||||||||| ||||| || || | || |||| || Sbjct 15028 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCA 14969 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || || |||||||| | || | ||||||||||| Sbjct 14968 AGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGG 14909 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || || | ||||| || | ||| || || | || ||||| Sbjct 14908 ATCTTCGACTTCAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGT 14853 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| || |||||||||||| Sbjct 14852 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 14819 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||| ||| | || |||| |||| ||| || || ||||| Sbjct 15238 TCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCCAACTGCTTACCAGCAAAG 15179 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| | || | ||||||||||| ||| || |||||| Sbjct 15178 ATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATTTTGGACTTGACGTTG 15119 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || || | || || || || || || |||||||| || Sbjct 15118 TCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACG 15059 Query 34971 AAGATCTGCATA 34982 || ||||||||| Sbjct 15058 AAAATCTGCATA 15047 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || || || | || |||| || ||||| || || || || Sbjct 15466 TCCTTCTGGATGTTGTAATCAGACAGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAA 15407 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | |||||||| || |||||| |||||| Sbjct 15406 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCTTGGATCTTCGACTTGACGT-- 15349 Query 34911 GCTATCGAT--TCACCGGC--CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| | ||| | ||| || || | || || || ||||| ||||||||||| Sbjct 15348 --TATCGATCGTATCCGACGACTCGACTTCCAGCGTAATCGTCTTTCCGGTGAGAGTCTT 15291 Query 34967 CACAAAGATCTGCATA 34982 || ||||| |||||| Sbjct 15290 GACGAAGATTTGCATA 15275 >seq1650 Length=88388 Score = 82.4 bits (90), Expect = 5e-11 Identities = 130/184 (71%), Gaps = 8/184 (4%) Strand=Plus/Plus Query 34794 TTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATT 34853 ||||| ||||| ||||| ||||| | ||| |||| || ||||| || || ||||| || Sbjct 72837 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 72896 Query 34854 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT 34913 || ||||||||||| | || | ||||||||||| |||||| ||||| || | Sbjct 72897 AGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGAC--AT--T 72952 Query 34914 ATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 ||||| || | ||| || || | ||| ||||| || ||||| | ||||| || Sbjct 72953 GTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 73012 Query 34970 AAAG 34973 ||| Sbjct 73013 GAAG 73016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625267669968