Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1367 241 2e-58 seq1789 197 3e-45 >seq1367 Length=27082 Score = 241 bits (266), Expect = 2e-58 Identities = 626/936 (67%), Gaps = 29/936 (3%) Strand=Plus/Minus Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761 ||||||| | |||| |||||||||||| ||||| || | | |||| | ||| Sbjct 8546 AGGGCAAGGGACGCCAAGTTACACACGGCAACCTCATCAGGGGCAGAGTACTCGACAATC 8487 Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821 || || || |||||| || |||||| || |||| || || || |||||| ||| Sbjct 8486 TCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 8427 Query 221822 GCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTG 221881 ||| |||||||| | ||| ||||| || ||||| ||||| | | ||||| | Sbjct 8426 CAAGCATCCTTGTACAACATGAAGGGGTTTCCTGTCTCGGTCTGAGACTCGAGAATGGAG 8367 Query 221882 TCCCAGAGTTCTCTGGCGCTC-ACCGTCCT-CTTGACTGCACCCTCGGTCTTTTCATACC 221939 | ||| || | ||||| || | ||| | | | || |||||| ||| || || | Sbjct 8366 TACCAAAGCT-TCTGGGCCTTGATGGTCTTGCGTCCCTT-ACCCTC---CTTCTCGTAGC 8312 Query 221940 CGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGG 221999 |||||| || |||| || || || | || ||| || || || | || Sbjct 8311 TCTCGTAGAGCGCCTCGAACTCATCGCCATAAACGTCCGCCAACCCAGGGCATTCGTTGG 8252 Query 222000 GACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCC 222059 | ||||| || |||||| ||| | | ||| | || ||||||||| |||||||||| Sbjct 8251 GGCACATGAGGGTCCAGTCACCGTTCTTCTCGACACGCTTCATGAAGAGATCCGGGATCC 8192 Query 222060 ACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGAT 222119 | || || | || | || | || || |||||| |||| ||| || ||||| | Sbjct 8191 AGAGAGCGTAGAACAAGTCACGGGCGCGGACTTCCTCCTTTCCGTGGTTCTTTCTCAGGT 8132 Query 222120 CCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTC 222179 ||| |||||||| | || |||||||| ||||| | |||| ||| | ||||||||| | Sbjct 8131 CCAGGAACTCAAACACATCCGCGTGCCATGGCTCAACGTAGATGGCGAAAGCGCCGGGAC 8072 Query 222180 GCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGT 222238 |||||||||||||||| || || || | ||| | |||||||| || || | || Sbjct 8071 GCTTGTTGCCACCCTGGTCAACGTATCT-TGCAGTGTTGTTGAAGACACGGAGCATGGGA 8013 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 || | ||||| || |||||||| || |||||| ||||| ||| | || || Sbjct 8012 ACAATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCAGTGGCAC---GGATA 7956 Query 222299 C--TGGCAG-ACATGCCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAG 222354 | ||| | || |||||||| ||||| || ||| ||||||||||| || ||||||| Sbjct 7955 CGGTGGATGTTCAATCCGATACCTCCGGCAGTCTTT-GAGATCATGGCACACGTCTTGAG 7897 Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414 |||||| ||| ||||| || |||||||| | || | || || || ||||||| Sbjct 7896 AGTGTCATAGATACCCTCAATGCTATCCTCCTTCATGTCGACCAAGAAGCAGGACGACAG 7837 Query 222415 CTGAG-ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCC 222473 ||| | | ||||| | || || || || || ||||| |||||||| ||||| Sbjct 7836 CTGGGCCTGTGGTGTACCA-GCATTGAAGAGTGTGGGGGAAGCGTGTGTGAAGTACTTGG 7778 Query 222474 TAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGG 222533 |||||| || | ||| ||||| | | | | || | || |||||||| | || Sbjct 7777 AAGACATGAGGTTGTATGTCTCGATGGTCTTCTCAATATCCTCGCCGTGAATGCCAACGG 7718 Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTG-----GAGCTGGAGAG 222588 | | ||| ||||| ||| ||||||| ||| | ||||| || ||||| Sbjct 7717 CAACACGCATAATCATGTGCTGCGGCCTCT---CAGCAACCTTGCCATCAAGGCGGAGA- 7662 Query 222589 CAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTA 222624 ||||| || | || || |||||||| |||||||| Sbjct 7661 -AGGTAGGACCTCTCAAGGGTCTTGAAGCCAAAGTA 7627 >seq1789 Length=64549 Score = 197 bits (218), Expect = 3e-45 Identities = 558/857 (65%), Gaps = 22/857 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || ||||||||| || |||||||| || Sbjct 51778 ATCTGGCAGATGTACAAGAAGGCCGAGGCATCTTTCTGGACCGCAGAGGAGATTGACCTT 51837 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 |||||||| | ||| |||| || | ||| ||||| ||| | ||| | Sbjct 51838 TCCAAGGACCTTCACGACTGGAACAACCGTCTCAACGACGATGAGCGCTACTTCATCTCC 51897 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || |||||||| || || || |||||||| || ||| | Sbjct 51898 CACGTTCTCGCTTTCTTCGCCGCCTCTGACGGAATTGTCAACGAGAACCTCCTCGAACGC 51957 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| ||| || || || | |||||| || |||||||||||||| || ||| Sbjct 51958 TTCAGCAGTGAGGTCCAAATCCCAGAGGCCCGCTGCTTCTACGGTTTCCAAATCATGATC 52017 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||| | ||| || || || || || || ||||| | || Sbjct 52018 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATCGACACATACATCAAGGAGCAG 52074 Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | | | || || || |||||| ||| || || |||| |||| |||||| Sbjct 52075 GCTCAACGCACATAC-CTCTTCAATGCCATTGAGACTATTCCTTGCATTAAGAAGAAGGC 52133 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| | | ||||||| | | || |||| || | | |||| || || || Sbjct 52134 CGACTGGGCAGTCAGGTGGATCCAAGACAAGGATTCTACCTTCGCCCAGCGCCTCGTTGC 52193 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 |||||| || || ||||| ||||| ||| ||| || ||||| |||| ||||||||||| Sbjct 52194 CTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTTTGCATCCATTTTCTGGCTCAA 52253 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||| | || || ||| || |||||||||||| | |||||||| Sbjct 52254 GAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCGAACGAGCTCATCTCTCGTGACGAGGG 52313 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069 |||||||| || || |||||||| |||| | | |||| | ||| || || Sbjct 52314 TCTCCACACTGACTTCGCCTGCCTTCTCTTCTC---CCACCTCAAGCAC-CGCCCAAGCA 52369 Query 26070 AG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 || || ||||| | |||| | |||||||| |||||| ||||||| Sbjct 52370 AGAAGGCCGTCCAAGACGTCATTACCGAGGCTGTCACCATCGAGCAGGAGTTCTTGACTG 52429 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188 | ||||||||| || | |||| ||||||||||||| Sbjct 52430 AGGCACTTCCCTGTGCCCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGT 52489 Query 26189 ATGTGGCCGAC---CATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTA 26245 || |||||| | |||||| | | || ||| || | ||||| || | | Sbjct 52490 TCGTCGCCGACAGACTTCTGCTTTCC---CTCGGAAACGAGAAGTACTACAAGTCGACCA 52546 Query 26246 ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGA 26305 |||| |||||||| ||||| ||||| || ||| ||| |||||||||||||| || ||| Sbjct 52547 ACCCATTCGACTTCATGGAGAACATCTCCCTGGCAGGCAAGACCAACTTCTTCGAGAAGC 52606 Query 26306 GGGTCGGCGACTATCAA 26322 | |||| |||||| ||| Sbjct 52607 GCGTCGCCGACTACCAA 52623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928820348160640