Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1271 93.3 3e-13 >seq1271 Length=16661 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || ||||| |||||||| || ||| || || | || ||||||| ||||| Sbjct 15497 ACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGACAGAGT 15438 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| || || ||||| || || || || || || || || || Sbjct 15437 ACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATACC 15378 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAA 480729 ||||| ||||| ||||| ||||| || || ||||| | | | | || || Sbjct 15377 CTCCTTATCTTGGATCTTCGACTTGACGTTATCGATCGTATCCGACGACTCGACTTCCA- 15319 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || || |||||||||||||| ||||| ||||| Sbjct 15318 GCGTAATCGTCTTTCCGGTGAGAGTCTTGACGAAGATTTG 15279 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | ||| || || || || || || || || | || || Sbjct 15269 ACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGT 15210 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || | ||||| |||||||| || | ||| || || || || ||||| || Sbjct 15209 ACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCC 15150 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||||||||| || ||||| ||||| ||||||| || | | || | Sbjct 15149 CTCCTTGTCTTGAATTTTGGACTTGACGTTGTCAATGGTATCAGATGACTCGA-CCTCCA 15091 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || || || || |||||||| |||||||| || Sbjct 15090 GCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTG 15051 Score = 87.8 bits (96), Expect = 1e-11 Identities = 155/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCT-AGAG 480609 |||||||||||| || | ||||| || || || || | || || || ||| || | Sbjct 15725 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGCG 15667 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | ||| ||| || || ||||| |||||||| || || || || || || || || || | Sbjct 15666 TCCTGCCATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATAC 15607 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCA 480728 | ||||| || |||||||| ||||| ||||| || |||| | | || || Sbjct 15606 CCTCCTTATCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAA-CCTCG 15548 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || ||||| || || ||||| || ||||| |||||||| || Sbjct 15547 AGAGTAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTG 15507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268088863441688