Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1523 140 2e-28 seq1271 127 1e-24 seq1650 95.1 8e-15 >seq1523 Length=98661 Score = 140 bits (154), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 8/221 (4%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 |||||||||| ||||| ||| ||||||||| ||||| |||||||| ||| | || || Sbjct 96424 CTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCA 96365 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || || || ||||| |||||||||||||| || |||||||| | || | ||||||||| Sbjct 96364 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 96305 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGT 34938 || | || || ||||| || | ||||| || | ||| || |||| ||| Sbjct 96304 TCCTGGATCTTGGACTTGAC--AT--TGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 96249 Query 34939 TATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979 || ||||| ||||| |||||||| || ||||| ||||||| Sbjct 96248 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 96208 >seq1271 Length=16661 Score = 127 bits (140), Expect = 1e-24 Identities = 159/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| ||||||||||||||| ||||| || || |||| |||| Sbjct 15031 AGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCC 14972 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||| || |||||||| || |||||||| | || | ||||||||||| Sbjct 14971 TCAAGCTGCTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 14912 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || | |||||| || | || || Sbjct 14911 TGGATCTTCGACTTCAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGAT 14856 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || ||||||||||| || ||||||||||| Sbjct 14855 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 14820 Score = 114 bits (126), Expect = 8e-21 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | |||| ||||||||| || || ||||| || ||| |||| | || Sbjct 14803 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGGGTGCGGCCGTCC 14744 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||||||||||||||||||||| ||||||||||| | || | ||||||||||| Sbjct 14743 TCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGGATTCCCTCCTTGTCT 14684 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || ||| || || | ||| |||||| Sbjct 14683 TGGATCTTGCTCTTGACGTTGTCGATGGTATCGGAGGACTCAACCTCGAGGGTGATGGTC 14624 Query 34946 TTTCCCGT 34953 || || || Sbjct 14623 TTGCCAGT 14616 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| |||||||| ||| | || |||| |||| ||||| || || || Sbjct 15239 CTCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCCAACTGCTTACCAGCAAA 15180 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | ||||| |||||| Sbjct 15179 GATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATTTTGGACTTGACGTT 15120 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || | ||| | |||||| || | || || ||||| || || || ||||| || Sbjct 15119 GTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTGCCAGTAAGAGTCTTGAC 15060 Query 34966 AAAGATCTGCAT 34977 || |||||||| Sbjct 15059 GAAAATCTGCAT 15048 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||||||||||||| ||||| ||||| || | | |||| Sbjct 15715 AGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTGCCATCC 15656 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || || || ||||| || |||||||| | || | |||||||| || Sbjct 15655 TCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCC 15596 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | ||| | ||| || || | || |||||| Sbjct 15595 TGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGTAATGGTC 15536 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| || || |||||||| Sbjct 15535 TTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 >seq1650 Length=88388 Score = 95.1 bits (104), Expect = 8e-15 Identities = 134/186 (72%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || || |||| |||| || || ||||| || || |||| Sbjct 72835 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 72894 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| ||||||||||| | || | ||||||||||| | || || ||||| || Sbjct 72895 TCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGAC--AT- 72951 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| || | ||| || |||| ||| |||||||| ||||| | |||||| Sbjct 72952 -TGTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTG 73010 Query 34964 ACAAAG 34969 || ||| Sbjct 73011 ACGAAG 73016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325684440483614