Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1271 120 3e-22 seq1523 116 3e-21 >seq1271 Length=16661 Score = 120 bits (132), Expect = 3e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||| ||||||||||| || | | Sbjct 15274 CCACCACGAAGACGGAGAACCAAATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 15215 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || |||| ||||||||| ||||| ||||| ||||||||||||| ||| Sbjct 15214 AGGGTACGGCCATCCTCCAACTGCTTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGA 15155 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 | || |||||||| | ||| ||| | ||| | |||| | | || || || || | Sbjct 15154 ATGCCCTCCTTGT-CTTGAATTTTGGACTTGA-CGTTGTCAATGGTATCAGATGACTCGA 15097 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| ||| ||||| || || || | ||| || || || |||||||| Sbjct 15096 CCTCCAGCGTAATCGTCTTGCCAGTAAGAGTCTTGACGAAAATCTGCAT 15048 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || | || || |||||||| || ||||| Sbjct 15011 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCAGCAAA 14952 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||||| ||||| | | Sbjct 14951 GATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTCACATT 14892 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||||| ||||| || || || || | || || || Sbjct 14891 GTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 14832 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 14831 GAAGATCTGCAT 14820 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || |||||||| || |||||||| ||| | Sbjct 15730 CCACCACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 15671 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | | || |||||||||||||| |||||||||| ||||||||||||| || Sbjct 15670 AGCGTCCTGCCATCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGG 15611 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||| ||| ||||| ||| | |||| | | ||||| || || || Sbjct 15610 ATACCCTCCTTATCCTGAATCTTCGACTTGA-CGTTGTCAATGGTGTCAGAAGACTCAAC 15552 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | || || || || || |||| || || || || |||||||| Sbjct 15551 CTCGAGAGTAATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | || | ||||| |||| |||||| || ||||||||||| | | Sbjct 15502 CCACCACGGAGGCGGAGAACAAGATGTAGCGTAGACTCCTTCTGGATGTTGTAATCAGAC 15443 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| ||||| || |||| ||||||||||||| || Sbjct 15442 AGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGGGGG 15383 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||| || |||||| ||| | | | | ||| || ||| || || Sbjct 15382 ATACCCTCCTTATCTTGGATCTTCGACTTGACGTTATCGATCGTATCCGACGACTCGACT 15323 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||| ||||| || || || | ||| || || || || ||||| Sbjct 15322 TCCAGCGTAATCGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 15276 >seq1523 Length=98661 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | |||| ||||| || | || |||||| || |||||||| || | Sbjct 96436 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 96377 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || |||| ||||||||||||| ||| Sbjct 96376 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 96317 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | |||||| ||| |||||| Sbjct 96316 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 96257 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||||| || ||||| || || ||||| Sbjct 96256 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 96210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450781732858480