Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1523 116 4e-21 seq1271 113 5e-20 seq1650 96.9 4e-15 >seq1523 Length=98661 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||||| || || | ||| || ||||| ||||| || ||||||||||| | Sbjct 96436 CCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 96377 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || |||| |||||||| || || || Sbjct 96376 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 96317 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | ||||||||||| ||||| Sbjct 96316 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 96257 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || ||||| |||||||| Sbjct 96256 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 96210 >seq1271 Length=16661 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTG 134554 || || | ||| | ||| || ||| ||||| || ||||||||||||| || || || Sbjct 15721 AGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTG 15662 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || ||||| || || ||||| |||| |||||||| || || || || || || Sbjct 15661 CCA-TCCTCCAGCTGCTTACCAGCAAATATCAGGCGCTGCTGGTCCGGTGGGATACCCTC 15603 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || ||||| || ||||| ||| | ||||| || || || || |||||||| Sbjct 15602 CTTATCCTGAATCTTCGACTTGACGTTGTCAATGGTGTCAGAAGACTCAACCTCGAGAGT 15543 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||| || ||||| | || || |||||||| ||||| Sbjct 15542 AATGGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 15504 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || || ||||| |||||||||||||| | ||| | || || | ||| Sbjct 15250 TGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTACGGCCATCCTCCAACTGC 15191 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| |||||||||||||| || || || ||||| || || ||||||||||| Sbjct 15190 TTACCAGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCTTGAATTTTG 15131 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | || || || || || || || || ||||| || || || || Sbjct 15130 GACTTGACGTTGTCAATGGTATCAGATGACTCGACCTCCAGCGTAATCGTCTTGCCAGTA 15071 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | ||| || |||||||| ||||| Sbjct 15070 AGAGTCTTGACGAAAATCTGCAT 15048 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| ||||||||||||||| | ||| || || || ||||| Sbjct 15023 GTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTG 14964 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || ||||| |||| |||||||| || || || || || || || || || || || Sbjct 14963 CTTTCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTGTCCTGGATCTT 14904 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || ||| | ||||||||||| || || || | ||| ||||| || || || Sbjct 14903 CGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCCAAAGTGATGGTCTTGCCAGT 14844 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 14843 GAGGGTCTTGACGAAGATCTGCAT 14820 >seq1650 Length=88388 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| || ||| | || || ||||| ||||| ||||| | Sbjct 72835 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 72894 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| || ||||| || || || || || || || ||||| || || ||||| || Sbjct 72895 TCAGGCGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 72954 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||||||||| ||||| || || || ||||| || || || || || || |||| Sbjct 72955 CGATAGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 73014 Query 134704 A 134704 | Sbjct 73015 A 73015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505385095387120