Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1789 141 1e-28 >seq1789 Length=64549 Score = 141 bits (156), Expect = 1e-28 Identities = 558/867 (64%), Gaps = 18/867 (2%) Strand=Plus/Minus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 ||| || || | |||||||| || | ||||| |||||||| || || || |||||| | Sbjct 52638 CATGACACCAGTCTTTTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCTGC 52579 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCC 39432 || || || || |||||||| || || || || || | || || | || | ||| Sbjct 52578 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGACTTGTAGTACTTCTCGTTTCC 52519 Query 39433 TAATTCTGAAATCAA---TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACA 39489 | |||| || ||| || || || || || |||||| ||||||| | Sbjct 52518 GAGG---GAAAGCAGAAGTCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 52462 Query 39490 ATTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTAC 39549 ||||| || | || | || || ||||| || | ||||| | |||||| || Sbjct 52461 GTTCATGCCGAGCAGGGCACAGGGAAGTGCCTCAGTCAAGAACTCCTGCTCGATGGTGAC 52402 Query 39550 GGCCTCTGTTATTATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTA 39607 ||||| || || | || | || || ||| | || || | ||| | || Sbjct 52401 AGCCTCGGTAATGA-CG-TCTTGGACGGCCTTCTTGCTTGGGCGGTGCTTGAGGTGGGAG 52344 Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 || | | ||||||||||||| || || ||||| || | | || | ||||| || Sbjct 52343 AAGAGAAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAG 52284 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || || |||| ||| || |||||||| |||||||| || |||| ||||| || || Sbjct 52283 AAGGTAAGGCCAGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGATGCAAAGGAGCCG 52224 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 || |||||||| || || || || ||||| ||||| || | || || | | | ||| Sbjct 52223 GAGAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGGCGCTGGGCGAAGGTAGAATCC 52164 Query 39788 TT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || || |||||| | |||||| || || |||||||| | ||||| || || || Sbjct 52163 TTGTCTTGGATCCACCTGACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATAGTCTCA 52104 Query 39845 ATAGCATTAAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903 || ||||| ||||| | |||| || | | || || | ||||| || || | || Sbjct 52103 ATGGCATTGAAGAGGT-ATGTGCGTTGAGCCTGCTCCTTGATGTATGTGTCGATGAGGAG 52045 Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963 || | || | || ||||| || ||| || || || ||||| || || | || Sbjct 52044 GGAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGAAGCAGCGGGC 51985 Query 39964 TTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATC 40023 || | ||||| ||||| | || | ||| | || || || || ||||| || Sbjct 51984 CTCTGGGATTTGGACCTCACTGCTGAAGCGTTCGAGGAGGTTCTCGTTGACAATTCCGTC 51925 Query 40024 ACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG--GGTGTCA-A 40080 | ||||| || || || | || || || || || |||||| | || | Sbjct 51924 AGAGGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGACG 51865 Query 40081 TTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGC 40140 || |||||||| | | || || || | || | || || || ||||| || || || Sbjct 51864 GTTGTTCCAGTCGTGAAGGTCCTTGGAAAGGTCAATCTCCTCTGCGGTCCAGAAAGATGC 51805 Query 40141 CTCTGCCTTTTTGTACATGTTCCATAT 40167 ||| ||||| |||||||| | ||| || Sbjct 51804 CTCGGCCTTCTTGTACATCTGCCAGAT 51778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686890717125840