Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1525 104 2e-17 >seq1525 Length=99198 Score = 104 bits (114), Expect = 2e-17 Identities = 236/354 (67%), Gaps = 11/354 (3%) Strand=Plus/Minus Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500 || |||||||| |||| ||||| | ||| |||||||||||||| ||| | || | Sbjct 87084 AACGGTCCTGAGGTCTTGAATAAGTTTGTCGGTCAATCGGAAGAGAATATCCGTAACCTC 87025 Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTAT 19559 || ||||| ||||| ||||| | || | ||||| | | ||| | |||||||| Sbjct 87024 TTCGCTGATGCTGAGAAAGAA-TACAAGGAGAGGGGCGACGAGAGTGAGCTTCACATTAT 86966 Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGT---------GTAAA 19610 || | || ||| | || || | || ||||| |||||| ||||| | | Sbjct 86965 CATCTTCGACGAACTTGATGCTGTGTGCAAGCAGAGAGGTGCTGGTGGTGGTGGCGGCAC 86906 Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||| || ||||| ||||||||| || | || | ||| | || ||||| |||| || Sbjct 86905 TGGTGTTGGTGACAGTGTTGTCAACCAGTTGCTTGCCAAACTTGATGGTGTGGACCAGCT 86846 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 || |||||| | | ||||| ||||| ||| || |||| | || || ||||| | Sbjct 86845 CAACAATATTATCCTCATTGGTATGACCAATCGAATGGATATGATTGATGATGCCTTGCT 86786 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGG 19784 || || || || |||| | | || || ||| | | |||||||||| ||| Sbjct 86785 TCGTCCTGGACGTCTGGAGGTCCACATGGAGATTTCCCTTCCCGATGAATCTGG 86732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397445798546530