Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20BL549_20[genbank_20GCA_5F001630585.1_202016 -04-25] 2,106 sequences; 25,864,194 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq1789 89.7 2e-12 >seq1789 Length=64549 Score = 89.7 bits (98), Expect = 2e-12 Identities = 123/171 (72%), Gaps = 1/171 (1%) Strand=Plus/Plus Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758 ||||| | |||| || || || ||||| | ||||| || | || || |||| ||| Sbjct 52173 CTTCGCCCAGCGCCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCCGGCTCCTT 52232 Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818 | || ||||| |||||| | || |||||||| || ||| || || ||||| |||| Sbjct 52233 T-GCATCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCGAACG 52291 Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 | || ||| ||| ||||||||| | || ||||||||||| ||||||| Sbjct 52292 AGCTCATCTCTCGTGACGAGGGTCTCCACACTGACTTCGCCTGCCTTCTCT 52342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588293141731170